RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SPTLC2O15270 562 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 OFD1O75665 1012 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 PBX3P40426 434 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 BECN1Q14457 450 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 CSPP1Q1MSJ5 1256 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 ARSHQ5FYA8 562 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 URGCPQ8TCY9 931 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 PDZD7Q9H5P4 517 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 TRIP11Q15643 1979 aa24.61■■□□□ 1.53
PTCHD3P2-201ENST00000424937 K7ERI5 159 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 YEATS4O95619 227 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 RNASELQ05823 741 aaKnown RBP24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 KCNT2Q6UVM3 1135 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 HACE1Q8IYU2 909 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 SPPL3Q8TCT6 385 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 POF1BQ8WVV4 589 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 REEP2Q9BRK0 252 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 TBC1D13Q9NVG8 400 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 THEGQ9P2T0 379 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 UNC80Q8N2C7 3258 aa24.6■■□□□ 1.53
PTCHD3P2-201ENST00000424937 SLC16A4O15374 487 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 ZC3H11AO75152 810 aaKnown RBP eCLIP24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 PPP6R2O75170 966 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 FGF18O76093 207 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 KRT18P05783 430 aaKnown RBP24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 PLS3P13797 630 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 DNAJB1P25685 340 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 MLH1P40692 756 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 RRAGBQ5VZM2 374 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 GBP3Q9H0R5 595 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 RNF39Q9H2S5 420 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 NSUN3Q9H649 340 aaKnown RBP24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 UBN1Q9NPG3 1134 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 ARHGAP28Q9P2N2 729 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 STK17AQ9UEE5 414 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 ODF2LQ9ULJ1 636 aa24.59■■□□□ 1.53
PTCHD3P2-201ENST00000424937 CITO14578 2027 aa24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 PPM1AP35813 382 aa24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 AFF1P51825 1210 aaKnown RBP24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 CAMK1Q14012 370 aa24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 TCEAL5Q5H9L2 206 aa24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 ADPGKQ9BRR6 497 aa24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 RBM19Q9Y4C8 960 aaKnown RBP24.58■■□□□ 1.53
PTCHD3P2-201ENST00000424937 FAM13AO94988 1023 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 AKAP5P24588 427 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SMTNP53814 917 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 BCAR1P56945 870 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 UBE3AQ05086 875 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 DNM1Q05193 864 aaKnown RBP24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 NT5DC1Q5TFE4 455 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ATF7IP2Q5U623 682 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 EEF1DP3Q658K8 133 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TAS1R3Q7RTX0 852 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SPIRE2Q8WWL2 714 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 GAD1Q99259 594 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TMEM134Q9H6X4 195 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 NRDE2Q9H7Z3 1164 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SPG21Q9NZD8 308 aa24.57■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ARL5CA6NH57 179 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 NT5C1B-RDH14C9J2C7 533 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 BRD1O95696 1058 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 POMCP01189 267 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 IRS1P35568 1242 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 DDIT3P35638 169 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 STAT6P42226 847 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ALDH7A1P49419 539 aaKnown RBP24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ATL3Q6DD88 541 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 CCDC73Q6ZRK6 1079 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SLC39A11Q8N1S5 342 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 KCNG4Q8TDN1 519 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZFP42Q96MM3 310 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZHX3Q9H4I2 956 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TLR9Q9NR96 1032 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 LARSQ9P2J5 1176 aaKnown RBP24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 KANSL3Q9P2N6 904 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PARP2Q9UGN5 583 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 GIT1Q9Y2X7 761 aa24.56■■□□□ 1.52
PTCHD3P2-201ENST00000424937 A0A087X0B3 334 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 CUTAO60888 179 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TBCAO75347 108 aaKnown RBP24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 GIT2Q14161 759 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 DCAF4L1Q3SXM0 396 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZNF280BQ86YH2 543 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PDILTQ8N807 584 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 MRPS27Q92552 414 aaKnown RBP24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 FAM193BQ96PV7 902 aaPredicted RBP24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 NTPCRQ9BSD7 190 aaKnown RBP24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 MRPL4Q9BYD3 311 aaKnown RBP24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PANK2Q9BZ23 570 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 DNAJB4Q9UDY4 337 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 KCNG1Q9UIX4 513 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 CFAP45Q9UL16 551 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZDHHC9Q9Y397 364 aa24.55■■□□□ 1.52
PTCHD3P2-201ENST00000424937 B4GALT3O60512 393 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SCNN1GP51170 649 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PLCB3Q01970 1234 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 STRN3Q13033 797 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TMEM161BQ8NDZ6 487 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PARVGQ9HBI0 331 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 KLK14Q9P0G3 267 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms