RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 VPS36Q86VN1 386 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 CPNE8Q86YQ8 564 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 SYCE1Q8N0S2 351 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 MGARPQ8TDB4 240 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 THOC1Q96FV9 657 aaKnown RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 RUSC1Q9BVN2 902 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 CNOT10Q9H9A5 744 aaKnown RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 ANKRD63C9JTQ0 380 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 RGS16O15492 202 aaPredicted RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 SPATA31C1P0DKV0 1188 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 CREB1P16220 341 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 NOVP48745 357 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 MRPL12P52815 198 aaKnown RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 KCNJ2P63252 427 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 PPATQ06203 517 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 DRAP1Q14919 205 aaPredicted RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 ARHGAP44Q17R89 818 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 ZC2HC1CQ53FD0 456 aaPredicted RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 MAP1SQ66K74 1059 aaPredicted RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 EPM2AIP1Q7L775 607 aaPredicted RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 OTUD6AQ7L8S5 288 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 CCDC63Q8NA47 563 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 RAB17Q9H0T7 212 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 KCNMB3Q9NPA1 279 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 INTS9Q9NV88 658 aaKnown RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 GRHL1Q9NZI5 618 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 A0A0A6YYK5 440 aaPredicted RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 hCG_1984214I3L0E3 225 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 LRRN2O75325 713 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 TRIM49P0CI25 452 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 TRIM49CP0CI26 452 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 SNHG28P0DPA3 235 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 STAT1P42224 750 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 RPL21P46778 160 aaKnown RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 MYO1EQ12965 1108 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 TTLL12Q14166 644 aaPredicted RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 TTC27Q6P3X3 843 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 ARMC9Q7Z3E5 817 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 PIGWQ7Z7B1 504 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 ZNF713Q8N859 430 aaPredicted RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 NYAP2Q9P242 653 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 SLC12A4Q9UP95 1085 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 TCRBV7S2A1N4TA0A589 114 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 GHRP10912 638 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 SPIRE1Q08AE8 756 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 CBWD6Q4V339 395 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 CBWD3Q5JTY5 395 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 CBWD5Q5RIA9 395 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 BANK1Q8NDB2 785 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 RFFLQ8WZ73 363 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 PRCCQ92733 491 aaPredicted RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 BHMT2Q9H2M3 363 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.45■□□□□ 0.069e-7■■■■■ 47
MSH5-206ENST00000423982 DNAJC12Q9UKB3 198 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 A8MUI8 341 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 ZBTB39O15060 712 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 TGFB1I1O43294 461 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 TBC1D12O60347 775 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 ASNSP08243 561 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 NUDT17P0C025 328 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 CHRM1P11229 460 aaPredicted RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 NMT1P30419 496 aaKnown RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 NT5C2P49902 561 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 EIF3BP55884 814 aaKnown RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 CTNNBL1Q8WYA6 563 aaPredicted RBP15.45■□□□□ 0.06
MSH5-206ENST00000423982 GPR88Q9GZN0 384 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 RRAGCQ9HB90 399 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 PTPN22Q9Y2R2 807 aa15.45■□□□□ 0.06
MSH5-206ENST00000423982 CENPFP49454 3210 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 PDXKO00764 312 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 ZBTB5O15062 677 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 CALUO43852 315 aaPredicted RBP15.44■□□□□ 0.06
MSH5-206ENST00000423982 UBOX5O94941 541 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 GCFC2P16383 781 aaKnown RBP15.44■□□□□ 0.06
MSH5-206ENST00000423982 GBP2P32456 591 aaPredicted RBP15.44■□□□□ 0.06
MSH5-206ENST00000423982 SOX5P35711 763 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 NAA25Q14CX7 972 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 TRPM8Q7Z2W7 1104 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 CCDC25Q86WR0 208 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 CCDC50Q8IVM0 306 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 KIF2BQ8N4N8 673 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 ANKS4BQ8N8V4 417 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 CYP2W1Q8TAV3 490 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 PIGOQ8TEQ8 1089 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 SLC20A1Q8WUM9 679 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 CENPTQ96BT3 561 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 L3MBTL3Q96JM7 780 aaPredicted RBP15.44■□□□□ 0.06
MSH5-206ENST00000423982 POP1Q99575 1024 aaKnown RBP15.44■□□□□ 0.06
MSH5-206ENST00000423982 ANO3Q9BYT9 981 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 FERP16591 822 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 VCAM1P19320 739 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 PTGIRP43119 386 aa15.44■□□□□ 0.06
MSH5-206ENST00000423982 KCNJ1P48048 391 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms