RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 CATSPER3Q86XQ3 398 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 GPC2Q8N158 579 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 LRRC8CQ8TDW0 803 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 LBHD1Q9BQE6 289 aaPredicted RBP16.16■□□□□ 0.18
SHISA9-201ENST00000423335 PCDHB4Q9Y5E5 795 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 TACC3Q9Y6A5 838 aa16.16■□□□□ 0.18
SHISA9-201ENST00000423335 CLDN3O15551 220 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 CNTN2Q02246 1040 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 BFSP1Q12934 665 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 CCDC62Q6P9F0 684 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 HAUS6Q7Z4H7 955 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 APBB1IPQ7Z5R6 666 aaPredicted RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 RIOX1Q9H6W3 641 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 RAB20Q9NX57 234 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 TTC7AQ9ULT0 858 aaPredicted RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 INPP5FQ9Y2H2 1132 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 H0Y3Z8 333 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 CSDE1O75534 798 aaKnown RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 JAK3P52333 1124 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 PMS2P54278 862 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 MMGT1Q8N4V1 131 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 EPN3Q9H201 632 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 CNOT10Q9H9A5 744 aaKnown RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 GBA2Q9HCG7 927 aaPredicted RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 ANAPC7Q9UJX3 599 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 RCCD1A6NED2 376 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 IRF6O14896 467 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 ZBTB39O15060 712 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 CTSHP09668 335 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 MYBP10242 640 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 MYBL2P10244 700 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 EIF3BP55884 814 aaKnown RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 TFDP1Q14186 410 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 EPHA7Q15375 998 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 C1orf54Q8WWF1 131 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 ACTR5Q9H9F9 607 aaPredicted RBP16.15■□□□□ 0.18
SHISA9-201ENST00000423335 PPP1R9AQ9ULJ8 1098 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 USP20Q9Y2K6 914 aa16.15■□□□□ 0.18
SHISA9-201ENST00000423335 LOC102724159A0A0B4J2E5 919 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 GOLGA8SH3BPF8 625 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 GRB10Q13322 594 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 PWP2Q15269 919 aaKnown RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 PASD1Q8IV76 773 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 MAIP1Q8WWC4 291 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 PSPC1Q8WXF1 523 aaKnown RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 RSAD2Q8WXG1 361 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 TYW1Q9NV66 732 aaKnown RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 TTLL3Q9Y4R7 772 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 KCNJ1P48048 391 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 MUM1Q2TAK8 710 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 DUSP9Q99956 384 aaKnown RBP16.14■□□□□ 0.17
SHISA9-201ENST00000423335 MXRA8Q9BRK3 442 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 HSD3B7Q9H2F3 369 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 ATP6V0A4Q9HBG4 840 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 KLC4Q9NSK0 619 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 SGK1O00141 431 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 MAP2K7O14733 419 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 EVI5O60447 810 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 ICAM1P05362 532 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 CA4P22748 312 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 ACOT2P49753 483 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 SOX10P56693 466 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 PDIA5Q14554 519 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 MAPK6Q16659 721 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 TSNAXIP1Q2TAA8 658 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 EP400NLQ6ZTU2 488 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 HAUS2Q9NVX0 235 aa16.14■□□□□ 0.17
SHISA9-201ENST00000423335 MED24O75448 989 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 SLC8A3P57103 927 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 MYO1EQ12965 1108 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 VGLL4Q14135 290 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 GRK7Q8WTQ7 553 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 CASKIN2Q8WXE0 1202 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 KCND1Q9NSA2 647 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 TROVE2P10155 538 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHISA9-201ENST00000423335 SEZ6Q53EL9 994 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 CCDC137Q6PK04 289 aaKnown RBP16.13■□□□□ 0.17
SHISA9-201ENST00000423335 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 EXOC1LA0A1B0GW35 172 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 RWDD2BP57060 319 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 PSMC6P62333 389 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 IL9RQ01113 521 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 SLMAPQ14BN4 828 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 FBXO16Q8IX29 292 aaPredicted RBP16.13■□□□□ 0.17
SHISA9-201ENST00000423335 USP38Q8NB14 1042 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 GPRC5AQ8NFJ5 357 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 SLC35G2Q8TBE7 412 aa16.13■□□□□ 0.17
SHISA9-201ENST00000423335 CNOT8Q9UFF9 292 aaKnown RBP16.13■□□□□ 0.17
SHISA9-201ENST00000423335 KCNG1Q9UIX4 513 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms