RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 HOXA6P31267 233 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 CLCN3P51790 818 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 PTGDRQ13258 359 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 TBC1D10CQ8IV04 446 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
UFD1-203ENST00000421968 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 ING5Q8WYH8 240 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 SCLT1Q96NL6 688 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 ZSCAN10Q96SZ4 725 aaPredicted RBP13.54□□□□□ -0.24
UFD1-203ENST00000421968 TMEM175Q9BSA9 504 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
UFD1-203ENST00000421968 TMEM9BQ9NQ34 198 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
UFD1-203ENST00000421968 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
UFD1-203ENST00000421968 UBIAD1Q9Y5Z9 338 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 PIAS3Q9Y6X2 628 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 NEDD4P46934 1319 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 PIEZO2Q9H5I5 2752 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 LNP1A1A4G5 178 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 CCL16O15467 120 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 MAFGO15525 162 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 SKIP12755 728 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
UFD1-203ENST00000421968 DSG1Q02413 1049 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 LRRC32Q14392 662 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 GRM2Q14416 872 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 UAP1L1Q3KQV9 507 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 TWF2Q6IBS0 349 aaKnown RBP13.53□□□□□ -0.24
UFD1-203ENST00000421968 TANGO2Q6ICL3 276 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 MCRS1Q96EZ8 462 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 MAP7D2Q96T17 732 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 SDF4Q9BRK5 362 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 C2orf42Q9NWW7 574 aa13.53□□□□□ -0.24
UFD1-203ENST00000421968 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 ARHGAP6O43182 974 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 XYLBO75191 536 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 CAVIN2O95810 425 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 HNRNPA1P09651 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
UFD1-203ENST00000421968 RPL17P18621 184 aaKnown RBP13.52□□□□□ -0.25
UFD1-203ENST00000421968 CCNE1P24864 410 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
UFD1-203ENST00000421968 CREB5Q02930 508 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 PPM1LQ5SGD2 360 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 LIN9Q5TKA1 542 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 Q6ZS52 159 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 PIK3R5Q8WYR1 880 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 IRF7Q92985 503 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 B3GALT6Q96L58 329 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 SLC32A1Q9H598 525 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 CCDC86Q9H6F5 360 aaKnown RBP13.52□□□□□ -0.25
UFD1-203ENST00000421968 JADE2Q9NQC1 790 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 CHST12Q9NRB3 414 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.52□□□□□ -0.25
UFD1-203ENST00000421968 MARCH5Q9NX47 278 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.25
UFD1-203ENST00000421968 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 SPAARA0A1B0GVQ0 90 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 FAM221BA6H8Z2 402 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 CSDE1O75534 798 aaKnown RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 PXNP49023 591 aaPredicted RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 SIM1P81133 766 aaPredicted RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 PDXDC2PQ6P474 469 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 TRMT1LQ7Z2T5 733 aaKnown RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 CKAP2LQ8IYA6 745 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 RNF168Q8IYW5 571 aaPredicted RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 CHCHD4Q8N4Q1 142 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 ELSPBP1Q96BH3 223 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 ZC3H10Q96K80 434 aaKnown RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 TRMT61BQ9BVS5 477 aaKnown RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 FAM105AQ9NUU6 356 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 FNIP2Q9P278 1114 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 KCNH3Q9ULD8 1083 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 RAXQ9Y2V3 346 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 MRPS23Q9Y3D9 190 aaKnown RBP13.51□□□□□ -0.25
UFD1-203ENST00000421968 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
UFD1-203ENST00000421968 IGKV6D-21A0A0A0MT36 114 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 PALM3A6NDB9 673 aaPredicted RBP13.5□□□□□ -0.25
UFD1-203ENST00000421968 J3QKU1 62 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 TK2O00142 265 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 MEIS2O14770 477 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 ATG7O95352 703 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 POMCP01189 267 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 C8AP07357 584 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 TMOD1P28289 359 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 OR1G1P47890 313 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
UFD1-203ENST00000421968 PLK5Q496M5 336 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 PABPC1LQ4VXU2 614 aaKnown RBP13.5□□□□□ -0.25
UFD1-203ENST00000421968 EFCAB12Q6NXP0 572 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 PIBF1Q8WXW3 757 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms