RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SLC30A5Q8TAD4 765 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 SLC35G2Q8TBE7 412 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PARD3BQ8TEW8 1205 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PDGFCQ9NRA1 345 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 RBPJLQ9UBG7 517 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 COG5Q9UP83 839 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 MAFGO15525 162 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 CSDE1O75534 798 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 FERP16591 822 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 TNFAIP3P21580 790 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 COPB2P35606 906 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 NLRP11P59045 1033 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 FAM193AP78312 1265 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 HTRA3P83110 453 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 NAA35Q5VZE5 725 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 AADACL2Q6P093 401 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 MIS18BP1Q6P0N0 1132 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 FBXO16Q8IX29 292 aaPredicted RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 LRRC71Q8N4P6 559 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 LRRC57Q8N9N7 239 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 ZNF516Q92618 1163 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 OPTNQ96CV9 577 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PPP1R16BQ96T49 567 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PCDHB18PQ96TA0 734 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 KRT12Q99456 494 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 TARS2Q9BW92 718 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 ATP6V0A4Q9HBG4 840 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 BZW2Q9Y6E2 419 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 PTPRJQ12913 1337 aa9.52□□□□□ -0.88
SNCA-206ENST00000420646 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 CEP104O60308 925 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 BUB1BO60566 1050 aaPredicted RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 CNMDO75829 334 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 DGAT1O75907 488 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 FARP2O94887 1054 aaPredicted RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 GLI1P08151 1106 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 TCP1P17987 556 aaKnown RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 GLRA2P23416 452 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 TCF7P36402 384 aaPredicted RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 BTBD6Q96KE9 485 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 PORCNQ9H237 461 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 LUC7LQ9NQ29 371 aaKnown RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 MAP2K7O14733 419 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 GJA5P36382 358 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 RPS6KA1Q15418 735 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 XKR3Q5GH77 459 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 LLGL2Q6P1M3 1020 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 XRRA1Q6P2D8 792 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 NOP9Q86U38 636 aaKnown RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 VPS36Q86VN1 386 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 SENP7Q9BQF6 1050 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 NTPCRQ9BSD7 190 aaKnown RBP9.52□□□□□ -0.89
SNCA-206ENST00000420646 SYT11Q9BT88 431 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 EFCC1Q9HA90 598 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 FBXO40Q9UH90 709 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 NR2E1Q9Y466 385 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 PPP2R3BQ9Y5P8 575 aa9.52□□□□□ -0.89
SNCA-206ENST00000420646 FTLP02792 175 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 OATP04181 439 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 MMEP08473 750 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 ITGA4P13612 1032 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 PAFAH1B1P43034 410 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 IREB2P48200 963 aaKnown RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 LIG4P49917 911 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 PRPF4BQ13523 1007 aaKnown RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 PEX26Q7Z412 305 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 RIOX2Q8IUF8 465 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 METTL13Q8N6R0 699 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CHST13Q8NET6 341 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 IFT81Q8WYA0 676 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 GLG1Q92896 1179 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 AGPAT1Q99943 283 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 NENFQ9UMX5 172 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 MKI67P46013 3256 aaKnown RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 A0A0G2JLL6 359 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 PPARDQ03181 441 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CFAP221Q4G0U5 840 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 WDR93Q6P2C0 686 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CCNI2Q6ZMN8 369 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 PRRT2Q7Z6L0 340 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 ZBTB33Q86T24 672 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 SAMD3Q8N6K7 520 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 FGD4Q96M96 766 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 ST6GALNAC4Q9H4F1 302 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 LCTP09848 1927 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms