RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 TDRD15B5MCY1 1934 aaKnown RBP17.26■□□□□ 0.35
ITGB1-204ENST00000417122 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 HIDE1A8MVS5 230 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 B4GALT3O60512 393 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 GLP2RO95838 553 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 BMP15O95972 392 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 PRKCBP05771 671 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 MLH1P40692 756 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 SLC11A1P49279 550 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
ITGB1-204ENST00000417122 HYIQ5T013 277 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 KCNK18Q7Z418 384 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
ITGB1-204ENST00000417122 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 INTS4Q96HW7 963 aaKnown RBP17.26■□□□□ 0.35
ITGB1-204ENST00000417122 MSLNLQ96KJ4 702 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 GAD1Q99259 594 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 TMEM175Q9BSA9 504 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 NXF3Q9H4D5 531 aaKnown RBP17.26■□□□□ 0.35
ITGB1-204ENST00000417122 CLEC1BQ9P126 229 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 CD207Q9UJ71 328 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 GIT1Q9Y2X7 761 aa17.26■□□□□ 0.35
ITGB1-204ENST00000417122 ARL5CA6NH57 179 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 TTLL13PA6NNM8 815 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
ITGB1-204ENST00000417122 ACKR2O00590 384 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 N4BP3O15049 544 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 INPPL1O15357 1258 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 MBTPS2O43462 519 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 ALDH2P05091 517 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 LIG1P18858 919 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 PRPF4BQ13523 1007 aaKnown RBP17.25■□□□□ 0.35
ITGB1-204ENST00000417122 BMS1Q14692 1282 aaKnown RBP17.25■□□□□ 0.35
ITGB1-204ENST00000417122 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 RINT1Q6NUQ1 792 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 DDX53Q86TM3 631 aaKnown RBP17.25■□□□□ 0.35
ITGB1-204ENST00000417122 VPS52Q8N1B4 723 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
ITGB1-204ENST00000417122 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 AK8Q96MA6 479 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 PNMA5Q96PV4 448 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 KIFC3Q9BVG8 833 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 RUSC1Q9BVN2 902 aa17.25■□□□□ 0.35
ITGB1-204ENST00000417122 BARX2Q9UMQ3 279 aaPredicted RBP17.25■□□□□ 0.35
ITGB1-204ENST00000417122 HIP1RO75146 1068 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 SYT1P21579 422 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 AKAP5P24588 427 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 CA8P35219 290 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 SCNN1GP51170 649 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 EFNA5P52803 228 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
ITGB1-204ENST00000417122 SMAD4Q13485 552 aaKnown RBP17.24■□□□□ 0.35
ITGB1-204ENST00000417122 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
ITGB1-204ENST00000417122 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
ITGB1-204ENST00000417122 C1orf186Q6ZWK4 172 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 CABP7Q86V35 215 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 MRPL43Q8N983 215 aaKnown RBP17.24■□□□□ 0.35
ITGB1-204ENST00000417122 VN1R2Q8NFZ6 395 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 DRC1Q96MC2 740 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 PLIN2Q99541 437 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 PDZD7Q9H5P4 517 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 PARP2Q9UGN5 583 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 USP20Q9Y2K6 914 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
ITGB1-204ENST00000417122 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 CCDC169A6NNP5 214 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 NRP1O14786 923 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 CXCL14O95715 111 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 EDN1P05305 212 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
ITGB1-204ENST00000417122 NPTX2P47972 431 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 PEX3P56589 373 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 COASYQ13057 564 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 KCNC3Q14003 757 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 COLGALT2Q8IYK4 626 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 DAW1Q8N136 415 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 SYT2Q8N9I0 419 aaPredicted RBP17.23■□□□□ 0.35
ITGB1-204ENST00000417122 ADPGKQ9BRR6 497 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 CD320Q9NPF0 282 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 PRKAG3Q9UGI9 489 aa17.23■□□□□ 0.35
ITGB1-204ENST00000417122 K7ERI5 159 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 SLC26A4O43511 780 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 SRGAP2BP0DMP2 458 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 CTSAP10619 480 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 SSTR3P32745 418 aaPredicted RBP17.22■□□□□ 0.35
ITGB1-204ENST00000417122 UBA7P41226 1012 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 OR1G1P47890 313 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 DSC1Q08554 894 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 MAPK7Q13164 816 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 DMP1Q13316 513 aaPredicted RBP17.22■□□□□ 0.35
ITGB1-204ENST00000417122 TMEM119Q4V9L6 283 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms