RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 COLGALT2Q8IYK4 626 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 ADSSL1Q8N142 457 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 HAS1Q92839 578 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 SNX21Q969T3 373 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 ZNF707Q96C28 371 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-202ENST00000416769 CEP170P1Q96L14 293 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 ZSCAN31Q96LW9 406 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-202ENST00000416769 GAD1Q99259 594 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 APOL6Q9BWW8 343 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 DHX33Q9H6R0 707 aaKnown RBP14.41□□□□□ -0.1
LINC00339-202ENST00000416769 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 SH3GLB2Q9NR46 395 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 TDRD15B5MCY1 1934 aaKnown RBP14.41□□□□□ -0.1
LINC00339-202ENST00000416769 OTOGLQ3ZCN5 2332 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 TSPAN1O60635 241 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 EFEMP2O95967 443 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 OR1G1P47890 313 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 SCNN1GP51170 649 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 NUBP1P53384 320 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 CYP4A11Q02928 519 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 SSRP1Q08945 709 aaKnown RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 GIT2Q14161 759 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 CTTNQ14247 550 aaKnown RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 EMC2Q15006 297 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 ANGPT1Q15389 498 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 OTOP3Q7RTS5 596 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 RNF168Q8IYW5 571 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 RNF149Q8NC42 400 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 DAGLBQ8NCG7 672 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 URGCPQ8TCY9 931 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 ASAP3Q8TDY4 903 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 NKD2Q969F2 451 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 RPS6KC1Q96S38 1066 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 LXNQ9BS40 222 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 HERC2P3Q9BVR0 1158 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 EMILIN2Q9BXX0 1053 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 IRF2BPLQ9H1B7 796 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 KCNMB3Q9NPA1 279 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
LINC00339-202ENST00000416769 FBXL21Q9UKT6 434 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 CA14Q9ULX7 337 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 IPPQ9Y573 584 aa14.4□□□□□ -0.1
LINC00339-202ENST00000416769 CEP250Q9BV73 2442 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 CCDC195A0A1B0GUA6 201 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 INPPL1O15357 1258 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 B4GALT5O43286 388 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 SOD2P04179 222 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 SKIP12755 728 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 NCLP19338 710 aaKnown RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 QARSP47897 775 aaKnown RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 PPP2R5CQ13362 524 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 KIAA0319Q5VV43 1072 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 FERMT3Q86UX7 667 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 PPFIBP1Q86W92 1011 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 PALB2Q86YC2 1186 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 DTWD2Q8NBA8 298 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 ACSF2Q96CM8 615 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 PGBD4Q96DM1 585 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 DYDC2Q96IM9 177 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 TMEM175Q9BSA9 504 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 GPR62Q9BZJ7 368 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 INO80BQ9C086 356 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 CXCL16Q9H2A7 254 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 SLKQ9H2G2 1235 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 NXF3Q9H4D5 531 aaKnown RBP14.39□□□□□ -0.11
LINC00339-202ENST00000416769 R4GN57 208 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 CLUHO75153 1309 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 DMXL1Q9Y485 3027 aa14.39□□□□□ -0.11
LINC00339-202ENST00000416769 CACNA1AO00555 2505 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 ARL5CA6NH57 179 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 WNT7AO00755 349 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 LRRN2O75325 713 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 CD2BP2O95400 341 aaKnown RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 DEXIO95424 95 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 ALDH2P05091 517 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 URODP06132 367 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 AKAP5P24588 427 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 YWHABP31946 246 aaKnown RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 GLUD2P49448 558 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 DSC1Q08554 894 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 SPIRE1Q08AE8 756 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 ME3Q16798 604 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 NCAPH2Q6IBW4 605 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 MOXD1Q6UVY6 613 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 SRGAP1Q7Z6B7 1085 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 TRIM22Q8IYM9 498 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 GSTCDQ8NEC7 633 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 PSPC1Q8WXF1 523 aaKnown RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 SLC7A3Q8WY07 619 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms