RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 PPP2R2CQ9Y2T4 447 aa11.18□□□□□ -0.62
TRIM27-203ENST00000414543 ZSWIM8A7E2V4 1837 aa11.18□□□□□ -0.62
TRIM27-203ENST00000414543 NRCAMQ92823 1304 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 INO80B-WBP1J3KQ70 363 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 P4HA2O15460 535 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CLDN3O15551 220 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 MSCO60682 206 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 F2P00734 622 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CCDC175P0C221 793 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 ACTN1P12814 892 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CYBAP13498 195 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 HNRNPH3P31942 346 aaKnown RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CYLC1P35663 651 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 PTENP60484 403 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 DLG4P78352 724 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 BEX3Q00994 111 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 ENPEPQ07075 957 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CYP24A1Q07973 514 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 MFSD10Q14728 455 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 PTPN14Q15678 1187 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 FSCN1Q16658 493 aaKnown RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 LINC01465Q8N7H1 131 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 PARD3BQ8TEW8 1205 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 CCDC127Q96BQ5 260 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 ZBTB45Q96K62 511 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 MSTO1Q9BUK6 570 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 INO80BQ9C086 356 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-203ENST00000414543 GANQ9H2C0 597 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 SPC25Q9HBM1 224 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 SETD4Q9NVD3 440 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 ANKFY1Q9P2R3 1169 aa11.17□□□□□ -0.62
TRIM27-203ENST00000414543 GOLGA6L9A6NEM1 432 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 KPNA6O60684 536 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 OFD1O75665 1012 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 TOM1L1O75674 476 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 UCHL3P15374 230 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 GCLMP48507 274 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 PSEN2P49810 448 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 CDK17Q00537 523 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 APBA1Q02410 837 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 PPP3CAQ08209 521 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 MARCH8Q5T0T0 291 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SFMBT2Q5VUG0 894 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 TRIM65Q6PJ69 517 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 CCDC170Q8IYT3 715 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 EHBP1Q8NDI1 1231 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 TRPV1Q8NER1 839 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 PLEKHO2Q8TD55 490 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 EVPLQ92817 2033 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 KAT2BQ92831 832 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SCLT1Q96NL6 688 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SPAG5Q96R06 1193 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 ACO2Q99798 780 aaKnown RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 DESI2Q9BSY9 194 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 KATNAL1Q9BW62 490 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 FZD8Q9H461 694 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 FBXL5Q9UKA1 691 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 EPN1Q9Y6I3 576 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 A0A087WZ62 844 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 A0A0B4J269 797 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 ACKR2O00590 384 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 ZEB2O60315 1214 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 NDUFA10O95299 355 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 IPO7O95373 1038 aaKnown RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 VTNP04004 478 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 EDN1P05305 212 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 TNNT1P13805 278 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 GTF2H1P32780 548 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 VEGFBP49765 207 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 MXI1P50539 228 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 MCCD1P59942 119 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 PRPF4BQ13523 1007 aaKnown RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 C1orf220Q5T0J3 134 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 NFRKBQ6P4R8 1299 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 LMBR1Q8WVP7 490 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 FNBP1Q96RU3 617 aa11.16□□□□□ -0.62
TRIM27-203ENST00000414543 FDXACB1Q9BRP7 624 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 INTS2Q9H0H0 1204 aaKnown RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 NHEJ1Q9H9Q4 299 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-203ENST00000414543 SIX2Q9NPC8 291 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms