RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TLE2Q04725 743 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 PPP2R5AQ15172 486 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 LRRC26Q2I0M4 334 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 TCP11X2Q5H9J9 407 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 RHPN2Q8IUC4 686 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 TMEM161BQ8NDZ6 487 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 ANKRD20A12PQ8NF67 263 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 IFT74Q96LB3 600 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 FGFBP2Q9BYJ0 223 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 ZHX3Q9H4I2 956 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.67
DDB1-202ENST00000414411 ADGRA3Q8IWK6 1321 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 KCNJ18B7U540 433 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 N4BP3O15049 544 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 RPLP2P05387 115 aaKnown RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 FECHP22830 423 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 NMT1P30419 496 aaKnown RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 GPC3P51654 580 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 CASP5P51878 434 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 COPB1P53618 953 aaKnown RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 PTENP60484 403 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 FAAP100Q0VG06 881 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 DMP1Q13316 513 aaPredicted RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 KCNJ12Q14500 433 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 TRIM60Q495X7 471 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 EPM2AIP1Q7L775 607 aaPredicted RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 CNGA4Q8IV77 575 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 KIAA0895Q8NCT3 520 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 GLIS3Q8NEA6 775 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 CCDC51Q96ER9 411 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 NFKBIZQ9BYH8 718 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 SLC39A2Q9NP94 309 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 EXOC1Q9NV70 894 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 TBC1D7Q9P0N9 293 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 ARHGAP28Q9P2N2 729 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDB1-202ENST00000414411 MAPK8IP1Q9UQF2 711 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 AKT3Q9Y243 479 aa10.89□□□□□ -0.67
DDB1-202ENST00000414411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDB1-202ENST00000414411 V9GYY5 206 aaPredicted RBP10.89□□□□□ -0.67
DDB1-202ENST00000414411 A0A087WZ62 844 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SOWAHDA6NJG2 315 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 PQBP1O60828 265 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 CHRNA1P02708 482 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 CASP14P31944 242 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SMTNP53814 917 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 GTF2BQ00403 316 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 TMEM62Q0P6H9 643 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 STIM1Q13586 685 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 MTF1Q14872 753 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 ELF2Q15723 593 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 COBLL1Q53SF7 1204 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 FAM26DQ5JW98 314 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 HAUS6Q7Z4H7 955 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 ZNF410Q86VK4 478 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 RNF149Q8NC42 400 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 CCDC47Q96A33 483 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 FDXACB1Q9BRP7 624 aaPredicted RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 TAB2Q9NYJ8 693 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 NOD1Q9Y239 953 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 DCDC2CA8MYV0 355 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 PSMA7O14818 248 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SLC16A4O15374 487 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 CAND2O75155 1236 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 CCDC175P0C221 793 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SCP2P22307 547 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 HOXD13P35453 343 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■□□□ 14.1
DDB1-202ENST00000414411 PMS1P54277 932 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 MRPS6P82932 125 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 MGAT3Q09327 533 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 TRIM14Q14142 442 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 TFDP1Q14186 410 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 KIZQ2M2Z5 673 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 RAD9BQ6WBX8 426 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 TAS1R3Q7RTX0 852 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 RSPH3Q86UC2 560 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 IRF2BP1Q8IU81 584 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SLC17A8Q8NDX2 589 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 ZNF397Q8NF99 534 aaPredicted RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 ZNF507Q8TCN5 953 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 CPLX3Q8WVH0 158 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 ZNF668Q96K58 619 aaPredicted RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 KIFC3Q9BVG8 833 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 SRRTQ9BXP5 876 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 CELF4Q9BZC1 486 aaKnown RBP10.88□□□□□ -0.67
DDB1-202ENST00000414411 GTPBP4Q9BZE4 634 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms