RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CCDC113Q9H0I3 377 aa29.09■■■□□ 2.25
VEGFA-207ENST00000413642 BARX2Q9UMQ3 279 aaPredicted RBP29.09■■■□□ 2.25
VEGFA-207ENST00000413642 SYT1P21579 422 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 AKAP5P24588 427 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 MLH1P40692 756 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 NDUFV1P49821 464 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 GRIN1Q05586 938 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 DUSP6Q16828 381 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 ARL6IP4Q66PJ3 421 aaKnown RBP29.08■■■□□ 2.25
VEGFA-207ENST00000413642 SLC27A1Q6PCB7 646 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 BRAPQ7Z569 592 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 DAW1Q8N136 415 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 RSPH1Q8WYR4 309 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 TMEM169Q96HH4 297 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 IGSF21Q96ID5 467 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 TRIM6Q9C030 488 aaPredicted RBP29.08■■■□□ 2.25
VEGFA-207ENST00000413642 C2orf40Q9H1Z8 148 aa29.08■■■□□ 2.25
VEGFA-207ENST00000413642 ARL5CA6NH57 179 aa29.07■■■□□ 2.24
VEGFA-207ENST00000413642 PRKCBP05771 671 aa29.07■■■□□ 2.24
VEGFA-207ENST00000413642 SF3A1Q15459 793 aaKnown RBP29.07■■■□□ 2.24
VEGFA-207ENST00000413642 FAM187BQ17R55 369 aa29.07■■■□□ 2.24
VEGFA-207ENST00000413642 PDE12Q6L8Q7 609 aaKnown RBP29.07■■■□□ 2.24
VEGFA-207ENST00000413642 RINT1Q6NUQ1 792 aa29.07■■■□□ 2.24
VEGFA-207ENST00000413642 FAM173BQ6P4H8 233 aa29.07■■■□□ 2.24
VEGFA-207ENST00000413642 KIFAP3Q92845 792 aa29.07■■■□□ 2.24
VEGFA-207ENST00000413642 K7ELQ4 463 aaPredicted RBP29.06■■■□□ 2.24
VEGFA-207ENST00000413642 HIP1RO75146 1068 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 SCNN1GP51170 649 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 PRPF4BQ13523 1007 aaKnown RBP29.06■■■□□ 2.24
VEGFA-207ENST00000413642 PPP2R5AQ15172 486 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 PUS10Q3MIT2 529 aaKnown RBP29.06■■■□□ 2.24
VEGFA-207ENST00000413642 HYIQ5T013 277 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 EEF1DP3Q658K8 133 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 C1orf186Q6ZWK4 172 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 FAM178BQ8IXR5 827 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 AUTS2Q8WXX7 1259 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 MSLNLQ96KJ4 702 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 IFT74Q96LB3 600 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 PRIMPOLQ96LW4 560 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 VN1R3Q9BXE9 311 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 PDZD7Q9H5P4 517 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 NGRNQ9NPE2 291 aaKnown RBP29.06■■■□□ 2.24
VEGFA-207ENST00000413642 UBN1Q9NPG3 1134 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 KLK14Q9P0G3 267 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 KANSL3Q9P2N6 904 aa29.06■■■□□ 2.24
VEGFA-207ENST00000413642 SSBP05455 408 aaKnown RBP eCLIP29.05■■■□□ 2.24
VEGFA-207ENST00000413642 PDCP20941 246 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 RESTQ13127 1097 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 MAPK7Q13164 816 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 MAPK6Q16659 721 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 VPS52Q8N1B4 723 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 FAM193BQ96PV7 902 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-207ENST00000413642 PARP2Q9UGN5 583 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 CD207Q9UJ71 328 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 CLIC4Q9Y696 253 aa29.05■■■□□ 2.24
VEGFA-207ENST00000413642 SFI1A8K8P3 1242 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 ACKR2O00590 384 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 MBTPS2O43462 519 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 PEX3P56589 373 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 RAD51AP2Q09MP3 1159 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 TMEM132AQ24JP5 1023 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 CABP7Q86V35 215 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 MRPL43Q8N983 215 aaKnown RBP29.04■■■□□ 2.24
VEGFA-207ENST00000413642 GSTCDQ8NEC7 633 aa29.04■■■□□ 2.24
VEGFA-207ENST00000413642 INTS4Q96HW7 963 aaKnown RBP29.04■■■□□ 2.24
VEGFA-207ENST00000413642 C2orf71A6NGG8 1288 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 CCDC169A6NNP5 214 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 NRP1O14786 923 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 INPPL1O15357 1258 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 CXCL14O95715 111 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 CA8P35219 290 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 NPTX2P47972 431 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 SMC1AQ14683 1233 aaKnown RBP29.03■■■□□ 2.24
VEGFA-207ENST00000413642 TMEM119Q4V9L6 283 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 NT5DC1Q5TFE4 455 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 LLGL2Q6P1M3 1020 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 DDX53Q86TM3 631 aaKnown RBP29.03■■■□□ 2.24
VEGFA-207ENST00000413642 COLGALT2Q8IYK4 626 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 LRRC15Q8TF66 581 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 KHSRPQ92945 711 aaKnown RBP eCLIP29.03■■■□□ 2.241e-9■■■□□ 15.1
VEGFA-207ENST00000413642 ZBP1Q9H171 429 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 CXCL16Q9H2A7 254 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 FAN1Q9Y2M0 1017 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 GIT1Q9Y2X7 761 aa29.03■■■□□ 2.24
VEGFA-207ENST00000413642 PRG3Q9Y2Y8 225 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-207ENST00000413642 ALDH2P05091 517 aa29.02■■■□□ 2.24
VEGFA-207ENST00000413642 CDK5RAP3Q96JB5 506 aa29.02■■■□□ 2.24
VEGFA-207ENST00000413642 TMEM175Q9BSA9 504 aa29.02■■■□□ 2.24
VEGFA-207ENST00000413642 MTMR6Q9Y217 621 aa29.02■■■□□ 2.24
VEGFA-207ENST00000413642 NPHP3-ACAD11A0A0J9YXS1 232 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 F8W810 466 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 N4BP3O15049 544 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 PLA2G4BP0C869 781 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 SMAD4Q13485 552 aaKnown RBP29.01■■■□□ 2.23
VEGFA-207ENST00000413642 KCNC3Q14003 757 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 HACE1Q8IYU2 909 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 SYT2Q8N9I0 419 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-207ENST00000413642 CDCA3Q99618 268 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-207ENST00000413642 MARCH5Q9NX47 278 aa29.01■■■□□ 2.23
VEGFA-207ENST00000413642 SNTG2Q9NY99 539 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms