RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 TTC27Q6P3X3 843 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 HAUS6Q7Z4H7 955 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 NOP9Q86U38 636 aaKnown RBP16.13■□□□□ 0.17
TTC39A-208ENST00000413473 FAM160B2Q86V87 743 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 CDAN1Q8IWY9 1227 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 C3orf20Q8ND61 904 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 VTI1AQ96AJ9 217 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.13■□□□□ 0.17
TTC39A-208ENST00000413473 GRHL1Q9NZI5 618 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 TMEM150BA6NC51 233 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 CYP26A1O43174 497 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 NUDT17P0C025 328 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 MAPTP10636 758 aaKnown RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 PYGMP11217 842 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 RPL21P46778 160 aaKnown RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 MXI1P50539 228 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 TCEAL1Q15170 157 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 HOOK3Q86VS8 718 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 CPNE8Q86YQ8 564 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 C12orf56Q8IXR9 622 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 FAM151AQ8WW52 585 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 SEC16BQ96JE7 1060 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 CABS1Q96KC9 395 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 RPS6KC1Q96S38 1066 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 PCYOX1Q9UHG3 505 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 ZNF646O15015 1829 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 COL2A1P02458 1487 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 HSPA6P17066 643 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 CTNNA2P26232 953 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 ALCAMQ13740 583 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 BYSLQ13895 437 aaKnown RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 SLC29A2Q14542 456 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 DENND2CQ68D51 928 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 CCDC137Q6PK04 289 aaKnown RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 SLC47A2Q86VL8 602 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 PPM1KQ8N3J5 372 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 BTBD6Q96KE9 485 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 KREMEN1Q96MU8 473 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 SEMA4AQ9H3S1 761 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 ZNF70Q9UC06 446 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 NOCTQ9UK39 431 aaKnown RBP16.12■□□□□ 0.17
TTC39A-208ENST00000413473 FEM1BQ9UK73 627 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 CCPG1Q9ULG6 757 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 TRPC6Q9Y210 931 aa16.12■□□□□ 0.17
TTC39A-208ENST00000413473 TCRBV7S2A1N4TA0A589 114 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 SLC16A4O15374 487 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 PLA2G6O60733 806 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 GZMAP12544 262 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 HSD17B4P51659 736 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 GTF2A1P52655 376 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 MAP2K1Q02750 393 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 ACTN3Q08043 901 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 CCDC121Q6ZUS5 278 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 FAM71AQ8IYT1 594 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 CNOT10Q9H9A5 744 aaKnown RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 SMIM23A6NLE4 172 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 PODXLO00592 558 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 NFIBO00712 420 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 QARSP47897 775 aaKnown RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 PEX3P56589 373 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 GTF2BQ00403 316 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 TNIP1Q15025 636 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 SEL1L2Q5TEA6 688 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 CPLX4Q7Z7G2 160 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 C7orf43Q8WVR3 580 aa16.11■□□□□ 0.17
TTC39A-208ENST00000413473 DBR1Q9UK59 544 aaKnown RBP16.11■□□□□ 0.17
TTC39A-208ENST00000413473 RPTORQ8N122 1335 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 ADRB2P07550 413 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 MMEP08473 750 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 UBAP2Q5T6F2 1119 aaKnown RBP16.1■□□□□ 0.17
TTC39A-208ENST00000413473 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
TTC39A-208ENST00000413473 SEMA4DQ92854 862 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 TATDN2Q93075 761 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CCDC127Q96BQ5 260 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 WNT8AQ9H1J5 351 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 C5orf60A6NFR6 353 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CCDC169A6NNP5 214 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 SPOPO43791 374 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 YWHABP31946 246 aaKnown RBP16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CDR1P51861 262 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 RASA3Q14644 834 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 DLGAP5Q15398 846 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 TKFCQ3LXA3 575 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 ERMARDQ5T6L9 678 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CHADLQ6NUI6 762 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CBWD2Q8IUF1 395 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CCDC13Q8IYE1 715 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CCDC105Q8IYK2 499 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CD101Q93033 1021 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 XPO6Q96QU8 1125 aaKnown RBP16.1■□□□□ 0.17
TTC39A-208ENST00000413473 NUP85Q9BW27 656 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 OSBPL7Q9BZF2 842 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms