RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 KRT39Q6A163 491 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 MAEAQ7L5Y9 396 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 PRRT2Q7Z6L0 340 aaPredicted RBP14.71□□□□□ -0.06
LIMS1-205ENST00000410093 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 KSR1Q8IVT5 923 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.71□□□□□ -0.063e-6■■■■■ 50.8
LIMS1-205ENST00000410093 CAPZA3Q96KX2 299 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 MFSD14AQ96MC6 490 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 PNKPQ96T60 521 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 SYT11Q9BT88 431 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 TMEM8AQ9HCN3 771 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 NRBP2Q9NSY0 501 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 SALL4Q9UJQ4 1053 aa14.71□□□□□ -0.06
LIMS1-205ENST00000410093 SIP14410 1827 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 IGKV6D-21A0A0A0MT36 114 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 GAS2O43903 313 aaKnown RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 TRIM49P0CI25 452 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 TRIM49CP0CI26 452 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 TNFAIP3P21580 790 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 ALDH5A1P51649 535 aaPredicted RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 GPC3P51654 580 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 MFAP3P55082 362 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 VSNL1P62760 191 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 APBA1Q02410 837 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 FAM160B1Q5W0V3 765 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 SLFN12LQ6IEE8 588 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 RHOT2Q8IXI1 618 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 EIF1ADQ8N9N8 165 aaKnown RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 GTF3C2Q8WUA4 911 aaPredicted RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 CTNNBL1Q8WYA6 563 aaPredicted RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 FAM167AQ96KS9 214 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 CBWD1Q9BRT8 395 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 ELP3Q9H9T3 547 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 ZNF302Q9NR11 478 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 ARHGAP28Q9P2N2 729 aa14.7□□□□□ -0.06
LIMS1-205ENST00000410093 SUCLA2Q9P2R7 463 aaPredicted RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 SEPT9Q9UHD8 586 aaPredicted RBP14.7□□□□□ -0.06
LIMS1-205ENST00000410093 ANKRD62A6NC57 917 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 DDX3XO00571 662 aaKnown RBP eCLIP14.69□□□□□ -0.06
LIMS1-205ENST00000410093 BUB1O43683 1085 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 ZNF862O60290 1169 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 LDHAP00338 332 aaKnown RBP14.69□□□□□ -0.06
LIMS1-205ENST00000410093 PIGRP01833 764 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 OATP04181 439 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 PLA2G4AP47712 749 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 IRX3P78415 501 aaPredicted RBP14.69□□□□□ -0.06
LIMS1-205ENST00000410093 PPP2R5EQ16537 467 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 PLA2G4FQ68DD2 849 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 FASTKD5Q7L8L6 764 aaKnown RBP14.69□□□□□ -0.06
LIMS1-205ENST00000410093 GPD1LQ8N335 351 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 ANKRD13CQ8N6S4 541 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 AFAP1L1Q8TED9 768 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 RFFLQ8WZ73 363 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 OPTNQ96CV9 577 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 SPATC1LQ9H0A9 340 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 EPC1Q9H2F5 836 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 ABCB6Q9NP58 842 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 DOCK5Q9H7D0 1870 aa14.69□□□□□ -0.06
LIMS1-205ENST00000410093 GZMAP12544 262 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 NAMPTP43490 491 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
LIMS1-205ENST00000410093 POLGP54098 1239 aaPredicted RBP14.68□□□□□ -0.06
LIMS1-205ENST00000410093 TNNC1P63316 161 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 STRN3Q13033 797 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 PPIL2Q13356 520 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 SMC1AQ14683 1233 aaKnown RBP14.68□□□□□ -0.06
LIMS1-205ENST00000410093 PHLDB3Q6NSJ2 640 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 NFRKBQ6P4R8 1299 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 CCDC60Q8IWA6 550 aaPredicted RBP14.68□□□□□ -0.06
LIMS1-205ENST00000410093 LRRC57Q8N9N7 239 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 TPCN2Q8NHX9 752 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 ACTRT1Q8TDG2 376 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 MORC4Q8TE76 937 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 PARD3BQ8TEW8 1205 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 SLC7A3Q8WY07 619 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
LIMS1-205ENST00000410093 ABHD8Q96I13 439 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 PKNOX2Q96KN3 472 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 ARID3AQ99856 593 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 AGPAT1Q99943 283 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 GPR88Q9GZN0 384 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 PCIF1Q9H4Z3 704 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 DHX33Q9H6R0 707 aaKnown RBP14.68□□□□□ -0.06
LIMS1-205ENST00000410093 TMEM134Q9H6X4 195 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 MED4Q9NPJ6 270 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 KCNH4Q9UQ05 1017 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 STYXL1Q9Y6J8 313 aa14.68□□□□□ -0.06
LIMS1-205ENST00000410093 SYNGAP1Q96PV0 1343 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 SPDYE5A6NIY4 337 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 ZNF233A6NK53 670 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 TULP1O00294 542 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 PDE2AO00408 941 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 ZNF185O15231 689 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 SEC31AO94979 1220 aaKnown RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 KIF4AO95239 1232 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 OSBPP22059 807 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 CLDN10P78369 228 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 PPP3CAQ08209 521 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 EMC2Q15006 297 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms