RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 KLHDC7AQ5VTJ3 777 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 SLFN12LQ6IEE8 588 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 EFCAB12Q6NXP0 572 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TOGARAM2Q6ZUX3 1019 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 REXO1L1PQ8IX06 675 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 LRRC71Q8N4P6 559 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 LMO3Q8TAP4 145 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TRIB2Q92519 343 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PCMTD1Q96MG8 357 aaPredicted RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 UPF3AQ9H1J1 476 aaKnown RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 FZD8Q9H461 694 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 KIAA1586Q9HCI6 787 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 SUCLA2Q9P2R7 463 aaPredicted RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 GABRQQ9UN88 632 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PPP2R2CQ9Y2T4 447 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 A0A0B4J269 797 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 LRRC53A6NM62 1247 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 DYNC1LI2O43237 492 aaPredicted RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 EXTL3O43909 919 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TRIM49P0CI25 452 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TRIM49CP0CI26 452 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 AKR1A1P14550 325 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 SLC9A1P19634 815 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 KLRC1P26715 233 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 HOXC8P31273 242 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 LIG4P49917 911 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 JAM2P57087 298 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PTENP60484 403 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 DLG4P78352 724 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 ADAM17P78536 824 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CYP24A1Q07973 514 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 GRIK4Q16099 956 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 EPC2Q52LR7 807 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TCERG1LQ5VWI1 586 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TRIM65Q6PJ69 517 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CBWD2Q8IUF1 395 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 ZBTB8OSQ8IWT0 167 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PARD3BQ8TEW8 1205 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 POMGNT1Q8WZA1 660 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF592Q92610 1267 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CHP1Q99653 195 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 GCNT4Q9P109 453 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 ADGRG1Q9Y653 693 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 MBLAC1A4D2B0 266 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 RRN3P2A6NIE6 340 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ZSCAN12O43309 604 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 DUSP11O75319 330 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 UCHL3P15374 230 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GTF2H1P32780 548 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MAP2K2P36507 400 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 CLCN3P51790 818 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MYL7Q01449 175 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MBTD1Q05BQ5 628 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 PPP3CAQ08209 521 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 PPFIA1Q13136 1202 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 HGSNATQ68CP4 663 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 CRELD2Q6UXH1 353 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 CCDC170Q8IYT3 715 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 RNF149Q8NC42 400 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 LENG1Q96BZ8 264 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 SAAL1Q96ER3 474 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 CRACR2AQ9BSW2 395 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MRPL4Q9BYD3 311 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 SUGCTQ9HAC7 445 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 IFT122Q9HBG6 1241 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 PTPRHQ9HD43 1115 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 AIPL1Q9NZN9 384 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 COQ4Q9Y3A0 265 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GOLGA6L9A6NEM1 432 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 LRRIQ3A6PVS8 624 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 LCA5LO95447 670 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 LDHAP00338 332 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 PRKCBP05771 671 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 RFX1P22670 979 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 FLT3LGP49771 235 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GJA9P57773 515 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 APBA1Q02410 837 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 SP3Q02447 781 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 PRKCZQ05513 592 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 PSMD6Q15008 389 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MFSD14CQ5VZR4 134 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 PDZRN4Q6ZMN7 1036 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF662Q6ZS27 426 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 TSHZ1Q6ZSZ6 1077 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 RHPN2Q8IUC4 686 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF784Q8NCA9 323 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 ZBTB10Q96DT7 871 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 BICD1Q96G01 975 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ACO2Q99798 780 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 TARS2Q9BW92 718 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 AGO2Q9UKV8 859 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 NRCAMQ92823 1304 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 TRIP11Q15643 1979 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GOLGA8IPA6NC78 632 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GOLGA8JA6NMD2 632 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 TTLL13PA6NNM8 815 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ACKR2O00590 384 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 TOM1L1O75674 476 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ECM2O94769 699 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 NDUFA10O95299 355 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms