RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CLDN3O15551 220 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 ZNF18P17022 549 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 ACOT2P49753 483 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
PMS1-204ENST00000409823 PPP1R12CQ9BZL4 782 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 AGO3Q9H9G7 860 aaKnown RBP13.76□□□□□ -0.21
PMS1-204ENST00000409823 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
PMS1-204ENST00000409823 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 KCNJ18B7U540 433 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 PES1O00541 588 aaKnown RBP13.76□□□□□ -0.21
PMS1-204ENST00000409823 CETN3O15182 167 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 CD4P01730 458 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 TPM4P67936 248 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 POU5F1BQ06416 359 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 FAAP100Q0VG06 881 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 KCNJ12Q14500 433 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 EDRF1Q3B7T1 1238 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 CDKAL1Q5VV42 579 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 SRGAP1Q7Z6B7 1085 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 CEP120Q8N960 986 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 FAM213AQ9BRX8 229 aa13.76□□□□□ -0.21
PMS1-204ENST00000409823 PIN4Q9Y237 131 aaKnown RBP13.76□□□□□ -0.21
PMS1-204ENST00000409823 RPS6KA5O75582 802 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 SERPINC1P01008 464 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 HOXA11P31270 313 aaPredicted RBP13.75□□□□□ -0.21
PMS1-204ENST00000409823 CD52P31358 61 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 MGAT3Q09327 533 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 TCP11X2Q5H9J9 407 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 CBWD2Q8IUF1 395 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 MSTO1Q9BUK6 570 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 TAB2Q9NYJ8 693 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 DCDC2CA8MYV0 355 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 TOM1L1O75674 476 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
PMS1-204ENST00000409823 CCL23P55773 120 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 MBTPS1Q14703 1052 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
PMS1-204ENST00000409823 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 FAM84AQ96KN4 292 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 VPS16Q9H269 839 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 ST3GAL5Q9UNP4 418 aa13.75□□□□□ -0.21
PMS1-204ENST00000409823 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
PMS1-204ENST00000409823 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 GOLGA5Q8TBA6 731 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 SCLYQ96I15 445 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 NAP1L5Q96NT1 182 aaPredicted RBP13.74□□□□□ -0.21
PMS1-204ENST00000409823 THAP9Q9H5L6 903 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 PDZD7Q9H5P4 517 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 PRDM5Q9NQX1 630 aaPredicted RBP13.74□□□□□ -0.21
PMS1-204ENST00000409823 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
PMS1-204ENST00000409823 AGO2Q9UKV8 859 aaKnown RBP13.74□□□□□ -0.21
PMS1-204ENST00000409823 CDH23Q9H251 3354 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 CNTNAP2Q9UHC6 1331 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 PRKCSHP14314 528 aaPredicted RBP13.74□□□□□ -0.21
PMS1-204ENST00000409823 TNFSF9P41273 254 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 MTIF2P46199 727 aaKnown RBP13.74□□□□□ -0.21
PMS1-204ENST00000409823 MRE11P49959 708 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 KRT31Q15323 416 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 ZPBP2Q6X784 338 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 ANKRD33Q7Z3H0 272 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 TMEM192Q8IY95 271 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 XXYLT1Q8NBI6 393 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 MMRN2Q9H8L6 949 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 DMAC2Q9NW81 257 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 IFNKQ9P0W0 207 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 FRMD4BQ9Y2L6 1034 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 HES2Q9Y543 173 aa13.74□□□□□ -0.21
PMS1-204ENST00000409823 A0A0B4J269 797 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 CYP2C18P33260 490 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 ABCD1P33897 745 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 FANCCQ00597 558 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 LPIN1Q14693 890 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 SNRNP35Q16560 246 aaKnown RBP13.73□□□□□ -0.21
PMS1-204ENST00000409823 DCAF17Q5H9S7 520 aaPredicted RBP13.73□□□□□ -0.21
PMS1-204ENST00000409823 FBXO47Q5MNV8 452 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 TRAF7Q6Q0C0 670 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 RPAINQ86UA6 219 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 FAM186BQ8IYM0 893 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 EIF2AQ9BY44 585 aaKnown RBP13.73□□□□□ -0.21
PMS1-204ENST00000409823 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 PADI3Q9ULW8 664 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 PIGRP01833 764 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 FAM187BQ17R55 369 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 TCERG1LQ5VWI1 586 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms