RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NR1I2O75469 434 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 POMCP01189 267 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 GLRA2P23416 452 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 TRAPPC10P48553 1259 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 ZXDAP98168 799 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 PTPN14Q15678 1187 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 HAUS3Q68CZ6 603 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 TRIM67Q6ZTA4 783 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 AUTS2Q8WXX7 1259 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 CPB2Q96IY4 423 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 POLR3CQ9BUI4 534 aaPredicted RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 EIF2AQ9BY44 585 aaKnown RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 SSX2IPQ9Y2D8 614 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 GIT1Q9Y2X7 761 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 ARL5CA6NH57 179 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 NRP1O14786 923 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 B4GALT3O60512 393 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 SPATA31C1P0DKV0 1188 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
CBX3-203ENST00000409747 MLH1P40692 756 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 AMHR2Q16671 573 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 SLC27A1Q6PCB7 646 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 BMP8AQ7Z5Y6 402 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 CATSPER3Q86XQ3 398 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 ZBTB8OSQ8IWT0 167 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
CBX3-203ENST00000409747 MRPL17Q9NRX2 175 aaKnown RBP16.35■□□□□ 0.21
CBX3-203ENST00000409747 TMEM221A6NGB7 291 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 LRRIQ4A6NIV6 560 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 M0R296 226 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 URODP06132 367 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 MUTP22033 750 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 RPA1P27694 616 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 AFF1P51825 1210 aaKnown RBP16.34■□□□□ 0.21
CBX3-203ENST00000409747 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 KIAA1841Q6NSI8 718 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 ZBTB33Q86T24 672 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 CABP7Q86V35 215 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 NOSTRINQ8IVI9 506 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 VN1R3Q9BXE9 311 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 C2orf40Q9H1Z8 148 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 TSHZ2Q9NRE2 1034 aa16.34■□□□□ 0.21
CBX3-203ENST00000409747 PRMT7Q9NVM4 692 aaPredicted RBP16.34■□□□□ 0.21
CBX3-203ENST00000409747 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 MED24O75448 989 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 SOD2P04179 222 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 EPCAMP16422 314 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 OR1G1P47890 313 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 SIGLEC14Q08ET2 396 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 TTC38Q5R3I4 469 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 ATAT1Q5SQI0 421 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 RARS2Q5T160 578 aaKnown RBP16.33■□□□□ 0.21
CBX3-203ENST00000409747 ELMSAN1Q6PJG2 1045 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 COLGALT2Q8IYK4 626 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 SLC22A17Q8WUG5 538 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 GAD1Q99259 594 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 APOL6Q9BWW8 343 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 POMKQ9H5K3 350 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 SFXN1Q9H9B4 322 aa16.33■□□□□ 0.21
CBX3-203ENST00000409747 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.21
CBX3-203ENST00000409747 TDRD15B5MCY1 1934 aaKnown RBP16.33■□□□□ 0.2
CBX3-203ENST00000409747 A0A1B0GUA9 196 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 ARHGEF35A5YM69 484 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 KLRC2P26717 231 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 SCNN1GP51170 649 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 DSC1Q08554 894 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 ZNF174Q15697 407 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 CDCA2Q69YH5 1023 aaPredicted RBP16.33■□□□□ 0.2
CBX3-203ENST00000409747 MAEAQ7L5Y9 396 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
CBX3-203ENST00000409747 NXF3Q9H4D5 531 aaKnown RBP16.33■□□□□ 0.2
CBX3-203ENST00000409747 DPP7Q9UHL4 492 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 PRG3Q9Y2Y8 225 aaPredicted RBP16.33■□□□□ 0.2
CBX3-203ENST00000409747 HES2Q9Y543 173 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 STK24Q9Y6E0 443 aa16.33■□□□□ 0.2
CBX3-203ENST00000409747 B4GALT5O43286 388 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 SSBP05455 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
CBX3-203ENST00000409747 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
CBX3-203ENST00000409747 FAM187BQ17R55 369 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 POTEGQ6S5H5 508 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 PBXIP1Q96AQ6 731 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 FBXL18Q96ME1 805 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 RAB34Q9BZG1 259 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 GPRC5CQ9NQ84 441 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 TECTAO75443 2155 aa16.32■□□□□ 0.2
CBX3-203ENST00000409747 A0A087WWV3 80 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 NPTXRO95502 500 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 ADH1AP07327 375 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 CNPP09543 421 aaKnown RBP16.31■□□□□ 0.2
CBX3-203ENST00000409747 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
CBX3-203ENST00000409747 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.24e-11■□□□□ 8.2
CBX3-203ENST00000409747 CLCN4P51793 760 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms