RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CALN1Q9BXU9 219 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 MTMR12Q9C0I1 747 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 C2orf40Q9H1Z8 148 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 FNDC3AQ9Y2H6 1198 aaKnown RBP12.27□□□□□ -0.44
SNX13-202ENST00000409604 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 PDXKO00764 312 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 AP5Z1O43299 807 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 PSMD10O75832 226 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 ALDH1A1P00352 501 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 AKR1A1P14550 325 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 PPP1R21Q6ZMI0 780 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 FBXL13Q8NEE6 735 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 SLC5A5Q92911 643 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 SEPT10Q9P0V9 454 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 B3GAT3O94766 335 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 TOMM70O94826 608 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 PLEKP08567 350 aaPredicted RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 CXCL8P10145 99 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 DNAJB2P25686 324 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 CCDC105Q8IYK2 499 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 CEP120Q8N960 986 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
SNX13-202ENST00000409604 TRIM10Q9UDY6 481 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 ASIC3Q9UHC3 531 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 SNED1Q8TER0 1413 aa12.27□□□□□ -0.45
SNX13-202ENST00000409604 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
SNX13-202ENST00000409604 STAM2O75886 525 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 NCOA4Q13772 614 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ELF2Q15723 593 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 NPY5RQ15761 445 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 NFRKBQ6P4R8 1299 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 RPUSD2Q8IZ73 545 aaKnown RBP12.26□□□□□ -0.45
SNX13-202ENST00000409604 NME8Q8N427 588 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ARHGAP39Q9C0H5 1083 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ZWILCHQ9H900 591 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNX13-202ENST00000409604 MAGEB2O15479 319 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ITGB3P05106 788 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 FERP16591 822 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 EFNA5P52803 228 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 SMAD1Q15797 465 aaKnown RBP12.26□□□□□ -0.45
SNX13-202ENST00000409604 UAP1Q16222 522 aaPredicted RBP12.26□□□□□ -0.45
SNX13-202ENST00000409604 LONRF2Q1L5Z9 754 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 METTL23Q86XA0 190 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 SLC17A8Q8NDX2 589 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ATP8B4Q8TF62 1192 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 HEMGNQ9BXL5 484 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ANKEF1Q9NU02 776 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 AMFRQ9UKV5 643 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 CASTOR2A6NHX0 329 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 BMP6P22004 513 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ATP11AP98196 1134 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 TMEM63BQ5T3F8 832 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 XRRA1Q6P2D8 792 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ZNF720Q7Z2F6 126 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 CPA5Q8WXQ8 436 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
SNX13-202ENST00000409604 PPP1R13BQ96KQ4 1090 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 ABHD10Q9NUJ1 306 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 COMMD10Q9Y6G5 202 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 CPB1P15086 417 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 CLCN1P35523 988 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 OAZ1P54368 228 aa12.26□□□□□ -0.45
SNX13-202ENST00000409604 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 B4GALT5O43286 388 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 NCK2O43639 380 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 FMO5P49326 533 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 TRIP13Q15645 432 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 ERCC6LQ2NKX8 1250 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ANO5Q75V66 913 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 BEST2Q8NFU1 509 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 BHMTQ93088 406 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 KATNAL1Q9BW62 490 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 KCNMB3Q9NPA1 279 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ACP6Q9NPH0 428 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 SNTG2Q9NY99 539 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ADAM22Q9P0K1 906 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 IGSF9BQ9UPX0 1349 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 A0A0G2JLL6 359 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 PPFIA4O75335 1185 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 RNF8O76064 485 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 KIF4AO95239 1232 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 SPATA31C1P0DKV0 1188 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 POLR2BP30876 1174 aaKnown RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 YWHAEP62258 255 aaKnown RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 PAK2Q13177 524 aa12.25□□□□□ -0.45
SNX13-202ENST00000409604 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
SNX13-202ENST00000409604 DRP2Q13474 957 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms