RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 FERP16591 822 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 FGFR4P22455 802 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 JAM2P57087 298 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 ADGRF4Q8IZF3 695 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-205ENST00000409455 ANKRD27Q96NW4 1050 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 ARL2BPQ9Y2Y0 163 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 NCANO14594 1321 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 GFPT2O94808 682 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 CCDC38Q502W7 563 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 GPATCH4Q5T3I0 446 aaKnown RBP16.61■□□□□ 0.25
LIMS2-205ENST00000409455 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 TRIM7Q9C029 511 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 JMJD4Q9H9V9 463 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 RXFP1Q9HBX9 757 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 GCNT4Q9P109 453 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 COL2A1P02458 1487 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-205ENST00000409455 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 ENO4A6NNW6 628 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 RIPK2O43353 540 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 EVI5O60447 810 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 PLA2G4BP0C869 781 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 TNNI2P48788 182 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 CCNG1P51959 295 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 ZNF211Q13398 564 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-205ENST00000409455 AUHQ13825 339 aaKnown RBP16.61■□□□□ 0.25
LIMS2-205ENST00000409455 PLS1Q14651 629 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 LRRC14Q15048 493 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 TNFAIP8L3Q5GJ75 292 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 NUGGCQ68CJ6 796 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 MIGA2Q7L4E1 593 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 SPATA21Q7Z572 469 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 GRHL1Q9NZI5 618 aa16.61■□□□□ 0.25
LIMS2-205ENST00000409455 DDX25Q9UHL0 483 aaKnown RBP16.61■□□□□ 0.25
LIMS2-205ENST00000409455 GREB1LQ9C091 1923 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-205ENST00000409455 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 EME2A4GXA9 379 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-205ENST00000409455 E9PMD0 336 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 PODXLO00592 558 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 PHF2O75151 1096 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 TMEM253P0C7T8 217 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 LMNB1P20700 586 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 CHRNA3P32297 505 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 EPHA7Q15375 998 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 TAF11Q15544 211 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 COA7Q96BR5 231 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 C18orf8Q96DM3 657 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 RUNDC3BQ96NL0 473 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 ADAM22Q9P0K1 906 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 DBR1Q9UK59 544 aaKnown RBP16.6■□□□□ 0.25
LIMS2-205ENST00000409455 KIAA1024Q9UPX6 916 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 SYNGAP1Q96PV0 1343 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 F5H6K3 240 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 FZD9O00144 591 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 GJB6O95452 261 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 ABCB4P21439 1286 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 STAT1P42224 750 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 RPL21P46778 160 aaKnown RBP16.6■□□□□ 0.25
LIMS2-205ENST00000409455 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-205ENST00000409455 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 ASRGL1Q7L266 308 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 FAM83AQ86UY5 434 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 RAB3IPQ96QF0 476 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-205ENST00000409455 YIPF3Q9GZM5 350 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 PCDHA12Q9UN75 941 aa16.6■□□□□ 0.25
LIMS2-205ENST00000409455 RARGP13631 454 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 HSPA6P17066 643 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 BRD2P25440 801 aaKnown RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 PPATQ06203 517 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 HYIQ5T013 277 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 EXOC3L1Q86VI1 746 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 GLYCTKQ8IVS8 523 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 LNX1Q8TBB1 728 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 ROPN1BQ9BZX4 212 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 ROPN1Q9HAT0 212 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 ZFATQ9P243 1243 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 AJAP1Q9UKB5 411 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 TRAF3IP3Q9Y228 551 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 TMEM120BA0PK00 339 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 USP17L10C9JJH3 530 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 WFS1O76024 890 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 ATP5DP30049 168 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 SKIV2L2P42285 1042 aaKnown RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 GMPSP49915 693 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 RBBP5Q15291 538 aaKnown RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 SAMD7Q7Z3H4 446 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 NAF1Q96HR8 494 aaKnown RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 OSBPL1AQ9BXW6 950 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
LIMS2-205ENST00000409455 SIX2Q9NPC8 291 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
LIMS2-205ENST00000409455 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms