RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TRIM49BA6NDI0 452 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 BACH1O14867 736 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 NVLO15381 856 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 STRNO43815 780 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 TJP3O95049 919 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SLURP2P0DP57 97 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PIM1P11309 404 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 RPL13P26373 211 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 ATP5DP30049 168 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 GSTT1P30711 240 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 RFC5P40937 340 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 CLCN2P51788 898 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PTGDRQ13258 359 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SPRYD7Q5W111 196 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 DENND2CQ68D51 928 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 CENPPQ6IPU0 288 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 MYLK4Q86YV6 388 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 FITM2Q8N6M3 262 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 CKAP2Q8WWK9 683 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PPP2R3CQ969Q6 453 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PCMTD1Q96MG8 357 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PSMB7Q99436 277 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PRMT1Q99873 361 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 ZMYND12Q9H0C1 365 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PUS7LQ9H0K6 701 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 NLRC4Q9NPP4 1024 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 ZDHHC18Q9NUE0 388 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 USP40Q9NVE5 1235 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 GALNT8Q9NY28 637 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 CEP72Q9P209 647 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 NKX1-2Q9UD57 310 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PARP2Q9UGN5 583 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SEC63Q9UGP8 760 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 B4E1Z4 1266 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 SLC1A4P43007 532 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 PTDSS1P48651 473 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 TNNI2P48788 182 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 PMS2P54278 862 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 VGLL4Q14135 290 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 DHX34Q14147 1143 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 RNF220Q5VTB9 566 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 DAB2IPQ5VWQ8 1189 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 DUPD1Q68J44 220 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 TRIM68Q6AZZ1 485 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 FAM83AQ86UY5 434 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 NELFCDQ8IXH7 590 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 KLHL7Q8IXQ5 586 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 WNK4Q96J92 1243 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 OLFM3Q96PB7 478 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 GBP5Q96PP8 586 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 SMC6Q96SB8 1091 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 LZTS2Q9BRK4 669 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 DISC1Q9NRI5 854 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 INTUQ9ULD6 942 aa11.42□□□□□ -0.58
NIF3L1-204ENST00000409357 A0A1B0GVG6 124 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 TMEM221A6NGB7 291 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 LRRC53A6NM62 1247 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 A8MUI8 341 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 MAP3K13O43283 966 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 DAPK3O43293 454 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 CA12O43570 354 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 AFPP02771 609 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 CPA3P15088 417 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 FLT3P36888 993 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 BTDP43251 543 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 IREB2P48200 963 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 KLK7P49862 253 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 INHBCP55103 352 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 USP4Q13107 963 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 SLC4A8Q2Y0W8 1093 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 USH1GQ495M9 461 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 FKBP1CQ5VVH2 108 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 ZNF365Q70YC5 407 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 LRRC57Q8N9N7 239 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 SMYD1Q8NB12 490 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 NSUN4Q96CB9 384 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 SLC10A4Q96EP9 437 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 NUDCD1Q96RS6 583 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 SPATA16Q9BXB7 569 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 R3HDMLQ9H3Y0 253 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 METTL14Q9HCE5 456 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 DDX4Q9NQI0 724 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 TMOD2Q9NZR1 351 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 ZSWIM5Q9P217 1185 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 DDX25Q9UHL0 483 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 LNPEPQ9UIQ6 1025 aa11.41□□□□□ -0.58
NIF3L1-204ENST00000409357 STXBP5LQ9Y2K9 1186 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms