RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 PPP1R3GB7ZBB8 358 aa29.43■■■□□ 2.3
CGREF1-204ENST00000402550 NCBP1Q09161 790 aaKnown RBP29.43■■■□□ 2.3
CGREF1-204ENST00000402550 C9orf50Q5SZB4 431 aa29.43■■■□□ 2.3
CGREF1-204ENST00000402550 FAM43BQ6ZT52 329 aaPredicted RBP29.43■■■□□ 2.3
CGREF1-204ENST00000402550 RTN4RL1Q86UN2 441 aaPredicted RBP29.43■■■□□ 2.3
CGREF1-204ENST00000402550 HOXA11P31270 313 aaPredicted RBP29.42■■■□□ 2.3
CGREF1-204ENST00000402550 SHHQ15465 462 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 FAM187BQ17R55 369 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 TMEM132AQ24JP5 1023 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 ANO6Q4KMQ2 910 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 TAS1R3Q7RTX0 852 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 HERVK_113Q902F9 699 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 MRPL4Q9BYD3 311 aaKnown RBP29.42■■■□□ 2.3
CGREF1-204ENST00000402550 DNAJC25Q9H1X3 360 aa29.42■■■□□ 2.3
CGREF1-204ENST00000402550 LAMA2P24043 3122 aaKnown RBP29.42■■■□□ 2.3
CGREF1-204ENST00000402550 ACKR2O00590 384 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 CAVIN2O95810 425 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 CD44P16070 742 aaKnown RBP29.41■■■□□ 2.3
CGREF1-204ENST00000402550 KCNA1Q09470 495 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 PAK1Q13153 545 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 PPP4R3CPQ6ZMV5 832 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 GBP3Q9H0R5 595 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 PRO3102Q9H379 93 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 CHST12Q9NRB3 414 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 AGPAT5Q9NUQ2 364 aa29.41■■■□□ 2.3
CGREF1-204ENST00000402550 ENPP3O14638 875 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 HNRNPDLO14979 420 aaKnown RBP29.4■■■□□ 2.3
CGREF1-204ENST00000402550 MGEA5O60502 916 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 TSPAN1O60635 241 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 BAIAP3O94812 1187 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 PRPF4BQ13523 1007 aaKnown RBP29.4■■■□□ 2.3
CGREF1-204ENST00000402550 DSC3Q14574 896 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 CHRDL2Q6WN34 429 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 HS2ST1Q7LGA3 356 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 ADAM2Q99965 735 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 TSPY26PQ9H489 355 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 CTNND2Q9UQB3 1225 aa29.4■■■□□ 2.3
CGREF1-204ENST00000402550 BICDL2A1A5D9 508 aa29.39■■■□□ 2.3
CGREF1-204ENST00000402550 B4GALT5O43286 388 aa29.39■■■□□ 2.3
CGREF1-204ENST00000402550 ZSCAN20P17040 1043 aaPredicted RBP29.39■■■□□ 2.3
CGREF1-204ENST00000402550 ERCC5P28715 1186 aaPredicted RBP29.39■■■□□ 2.3
CGREF1-204ENST00000402550 LIG4P49917 911 aa29.39■■■□□ 2.3
CGREF1-204ENST00000402550 GOLGA5Q8TBA6 731 aa29.39■■■□□ 2.3
CGREF1-204ENST00000402550 NELFBQ8WX92 580 aa29.39■■■□□ 2.3
CGREF1-204ENST00000402550 TSG101Q99816 390 aa29.39■■■□□ 2.3
CGREF1-204ENST00000402550 TSPYL2Q9H2G4 693 aaPredicted RBP29.39■■■□□ 2.3
CGREF1-204ENST00000402550 CXXC1Q9P0U4 656 aaPredicted RBP29.39■■■□□ 2.3
CGREF1-204ENST00000402550 PIN4Q9Y237 131 aaKnown RBP29.39■■■□□ 2.3
CGREF1-204ENST00000402550 TTLL13PA6NNM8 815 aa29.39■■■□□ 2.29
CGREF1-204ENST00000402550 EFCAB14O75071 495 aa29.39■■■□□ 2.29
CGREF1-204ENST00000402550 EDN1P05305 212 aa29.39■■■□□ 2.29
CGREF1-204ENST00000402550 ARF4P18085 180 aaPredicted RBP29.39■■■□□ 2.29
CGREF1-204ENST00000402550 LINC01599Q8WXQ3 324 aa29.39■■■□□ 2.29
CGREF1-204ENST00000402550 P2RX5Q93086 422 aa29.39■■■□□ 2.29
CGREF1-204ENST00000402550 TYW1Q9NV66 732 aaKnown RBP29.39■■■□□ 2.29
CGREF1-204ENST00000402550 USP20Q9Y2K6 914 aa29.39■■■□□ 2.29
CGREF1-204ENST00000402550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.38■■■□□ 2.29
CGREF1-204ENST00000402550 CCNE1P24864 410 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 AXLP30530 894 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 HOXD13P35453 343 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 SNRPFP62306 86 aaKnown RBP29.38■■■□□ 2.29
CGREF1-204ENST00000402550 RASIP1Q5U651 963 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 ZPBP2Q6X784 338 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 C11orf57Q6ZUT1 292 aaPredicted RBP29.38■■■□□ 2.29
CGREF1-204ENST00000402550 KCTD10Q9H3F6 313 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 RGS18Q9NS28 235 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 CGNQ9P2M7 1197 aaKnown RBP29.38■■■□□ 2.29
CGREF1-204ENST00000402550 RWDD2AQ9UIY3 292 aa29.38■■■□□ 2.29
CGREF1-204ENST00000402550 MICAL3Q7RTP6 2002 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 A0A1B0GUA9 196 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 PDXKO00764 312 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 CALUO43852 315 aaPredicted RBP29.37■■■□□ 2.29
CGREF1-204ENST00000402550 LRRC63Q05C16 580 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 PRPF38BQ5VTL8 546 aaKnown RBP29.37■■■□□ 2.29
CGREF1-204ENST00000402550 CENPPQ6IPU0 288 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.37■■■□□ 2.29
CGREF1-204ENST00000402550 CPB2Q96IY4 423 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 CNTNAP2Q9UHC6 1331 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 ZMYM2Q9UBW7 1377 aa29.37■■■□□ 2.29
CGREF1-204ENST00000402550 ZBBXA8MT70 800 aa29.36■■■□□ 2.29
CGREF1-204ENST00000402550 PIGRP01833 764 aa29.36■■■□□ 2.29
CGREF1-204ENST00000402550 WDR5P61964 334 aaKnown RBP29.36■■■□□ 2.29
CGREF1-204ENST00000402550 TARS2Q9BW92 718 aaKnown RBP29.36■■■□□ 2.29
CGREF1-204ENST00000402550 ZNF165P49910 485 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 MTIF3Q9H2K0 278 aaKnown RBP29.35■■■□□ 2.29
CGREF1-204ENST00000402550 SEMA6BQ9H3T3 888 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 STX17P56962 302 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 ATF7IP2Q5U623 682 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 TWF2Q6IBS0 349 aaKnown RBP29.35■■■□□ 2.29
CGREF1-204ENST00000402550 SLFN12LQ6IEE8 588 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 NOTUMQ6P988 496 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 SLC24A5Q71RS6 500 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 RNPC3Q96LT9 517 aaKnown RBP29.35■■■□□ 2.29
CGREF1-204ENST00000402550 ACO2Q99798 780 aaKnown RBP29.35■■■□□ 2.29
CGREF1-204ENST00000402550 TRAIPQ9BWF2 469 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 TRAF3IP3Q9Y228 551 aa29.35■■■□□ 2.29
CGREF1-204ENST00000402550 C9IYK1 514 aa29.34■■■□□ 2.29
CGREF1-204ENST00000402550 MATR3P43243 847 aaKnown RBP eCLIP29.34■■■□□ 2.29
CGREF1-204ENST00000402550 FOXR2Q6PJQ5 311 aa29.34■■■□□ 2.29
CGREF1-204ENST00000402550 CDR2LQ86X02 465 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms