RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 SNRNP35Q16560 246 aaKnown RBP11.95□□□□□ -0.5
SCFD2-202ENST00000401642 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 FAM182AQ5T1J6 154 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 SPOPLQ6IQ16 392 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 OTUD6AQ7L8S5 288 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 FBXO25Q8TCJ0 367 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 ACTRT1Q8TDG2 376 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 CPA5Q8WXQ8 436 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 FMO2Q99518 471 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 RPAP3Q9H6T3 665 aaPredicted RBP11.95□□□□□ -0.5
SCFD2-202ENST00000401642 AGO4Q9HCK5 861 aaKnown RBP11.95□□□□□ -0.5
SCFD2-202ENST00000401642 SUCLA2Q9P2R7 463 aaPredicted RBP11.95□□□□□ -0.5
SCFD2-202ENST00000401642 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
SCFD2-202ENST00000401642 ZNF536O15090 1300 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 GJB6O95452 261 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 ACOT2P49753 483 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 MTERF2Q49AM1 385 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 RNF207Q6ZRF8 634 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 ATG4AQ8WYN0 398 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 NUP85Q9BW27 656 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 MRIQ9BWK5 157 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 KMT5AQ9NQR1 393 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 CEP83Q9Y592 693 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 MYH11P35749 1972 aa11.95□□□□□ -0.5
SCFD2-202ENST00000401642 MYO1FO00160 1098 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 PLSCR1O15162 318 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 KIAA0754O94854 1291 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ICAM1P05362 532 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 TMEM253P0C7T8 217 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 PLS3P13797 630 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 GUCY2CP25092 1073 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 TAB3Q8N5C8 712 aaPredicted RBP11.94□□□□□ -0.5
SCFD2-202ENST00000401642 SUPT20HQ8NEM7 779 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 LRRC45Q96CN5 670 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ANKFY1Q9P2R3 1169 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ODF2LQ9ULJ1 636 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ANKRD62A6NC57 917 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ECM2O94769 699 aaPredicted RBP11.94□□□□□ -0.5
SCFD2-202ENST00000401642 CCDC172P0C7W6 258 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 PYGMP11217 842 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 TNNI1P19237 187 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 CNGA1P29973 690 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 HMGCS2P54868 508 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 SETQ01105 290 aaPredicted RBP11.94□□□□□ -0.5
SCFD2-202ENST00000401642 NBPF12Q5TAG4 269 aaPredicted RBP11.94□□□□□ -0.5
SCFD2-202ENST00000401642 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
SCFD2-202ENST00000401642 PRUNE1Q86TP1 453 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 NLRX1Q86UT6 975 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 BSNDQ8WZ55 320 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 HES6Q96HZ4 224 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 KREMEN1Q96MU8 473 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 ZNF831Q5JPB2 1677 aa11.94□□□□□ -0.5
SCFD2-202ENST00000401642 PHF20L1A8MW92 1017 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 CLDN3O15551 220 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 DHX15O43143 795 aaKnown RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 NPTX2P47972 431 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 TTC31Q49AM3 519 aaPredicted RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 FOXR2Q6PJQ5 311 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 CCDC50Q8IVM0 306 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 OTUD6BQ8N6M0 293 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 MRRFQ96E11 262 aaKnown RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 PWWP2AQ96N64 755 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 DMAC2Q9NW81 257 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 SEL1LQ9UBV2 794 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 CNOT8Q9UFF9 292 aaKnown RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 CAPN7Q9Y6W3 813 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 CAND2O75155 1236 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ADSSP30520 456 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 PPP1R7Q15435 360 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 HP1BP3Q5SSJ5 553 aaPredicted RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 MYOZ2Q9NPC6 264 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 RNF146Q9NTX7 359 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 TMEM59LQ9UK28 342 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ATRNL1Q5VV63 1379 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 PPP1R37O75864 691 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ACSL3O95573 720 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 VCAM1P19320 739 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ZNF131P52739 623 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 GPC5P78333 572 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 TRAF1Q13077 416 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 DMP1Q13316 513 aaPredicted RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ZNF394Q53GI3 561 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 SNRNP48Q6IEG0 339 aaKnown RBP11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 JAMLQ86YT9 394 aa11.93□□□□□ -0.5
SCFD2-202ENST00000401642 ZNF564Q8TBZ8 553 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms