RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 GOLPH3LQ9H4A5 285 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PRDM5Q9NQX1 630 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 USE1Q9NZ43 259 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 TRIM71Q2Q1W2 868 aaKnown RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 SNF8Q96H20 258 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 TBC1D23Q9NUY8 699 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 GDAQ9Y2T3 454 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 DFFAO00273 331 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 PGM1P36871 562 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 GGCXP38435 758 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 TUBGCP3Q96CW5 907 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PRKCQQ04759 706 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 ICE2Q659A1 982 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 ADCK2Q7Z695 626 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 NUP93Q8N1F7 819 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 CNBD2Q96M20 576 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 ANKRD65E5RJM6 399 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 ZNF189O75820 626 aaPredicted RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 CIAO1O76071 339 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 KRT16P08779 473 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 RABGAP1LQ5R372 815 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 TMC4Q7Z404 712 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 YEATS2Q9ULM3 1422 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 HIST1H2AGP0C0S8 130 aaPredicted RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 HIST1H2ADP20671 130 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 BCAR1P56945 870 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 HIST1H2AHQ96KK5 128 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 AGBL1Q96MI9 1066 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 HIST1H2AJQ99878 128 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 H2AFJQ9BTM1 129 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 DBNDD1Q9H9R9 158 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 MYO1CO00159 1063 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 AKAP10O43572 662 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 GYS2P54840 703 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 RAB14P61106 215 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 MCPH1Q8NEM0 835 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 CYGBQ8WWM9 190 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 MAP4K1Q92918 833 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 SLC10A4Q96EP9 437 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 RALAP11233 206 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 ASAP3Q8TDY4 903 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 PPP1R36Q96LQ0 422 aa12.3□□□□□ -0.44
HLCS-202ENST00000399120 EXOSC4Q9NPD3 245 aaKnown RBP12.3□□□□□ -0.44
HLCS-202ENST00000399120 A2MP01023 1474 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 ABCC4O15439 1325 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 A0A087WWV3 80 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 EIF3DO15371 548 aaKnown RBP eCLIP12.29□□□□□ -0.44
HLCS-202ENST00000399120 TLR2O60603 784 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 ATXN7L3BQ96GX2 97 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 DHX35Q9H5Z1 703 aaKnown RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 PSD3Q9NYI0 1048 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 LRRC53A6NM62 1247 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 ATP9BO43861 1147 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 MYBL1P10243 752 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 CACNA2D2Q9NY47 1150 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 LRRC14Q15048 493 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 MXD3Q9BW11 206 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 SESN1Q9Y6P5 492 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 SH2B2O14492 632 aaPredicted RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 ARL6IP4Q66PJ3 421 aaKnown RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 FBXO38Q6PIJ6 1188 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 MIGA2Q7L4E1 593 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 PIGOQ8TEQ8 1089 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 DIS3LQ8TF46 1054 aaKnown RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 DTNBP1Q96EV8 351 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 SIK2Q9H0K1 926 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 FKBP9O95302 570 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 GNA15P30679 374 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 PPP3CCP48454 512 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 GCLMP48507 274 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 COBLL1Q53SF7 1204 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 MTHFD1LQ6UB35 978 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 UNC13DQ70J99 1090 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 FKBP9P1Q75LS8 142 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 FGD2Q7Z6J4 655 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
HLCS-202ENST00000399120 PAIP2BQ9ULR5 123 aaKnown RBP12.29□□□□□ -0.44
HLCS-202ENST00000399120 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms