RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ADAM21Q9UKJ8 722 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 STYXL1Q9Y6J8 313 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 WDR81Q562E7 1941 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 IGKV6D-21A0A0A0MT36 114 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZNF233A6NK53 670 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 H3BQF6 201 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MTA2O94776 668 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 LDHAP00338 332 aaKnown RBP19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZBTB48P10074 688 aaPredicted RBP19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MATR3P43243 847 aaKnown RBP eCLIP19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CLDN10P78369 228 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CYP24A1Q07973 514 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 NEDD9Q14511 834 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 KCNV1Q6PIU1 500 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ANKRD35Q8N283 1001 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 WHAMMQ8TF30 809 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 POMGNT1Q8WZA1 660 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 NT5C1BQ96P26 610 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CARD9Q9H257 536 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 NRBP2Q9NSY0 501 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SEPT9Q9UHD8 586 aaPredicted RBP19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SNCAIPQ9Y6H5 919 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SSC5DA1L4H1 1573 aa19.14■□□□□ 0.65
HLA-DQB1-204ENST00000399084 KIAA1217Q5T5P2 1943 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ANKRD63C9JTQ0 380 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 OPA1O60313 960 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GPC5P78333 572 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GCNT1Q02742 428 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 STRN3Q13033 797 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CUL1Q13616 776 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 R3HDM1Q15032 1099 aaKnown RBP19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 C11orf63Q6NUN7 778 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CCDC60Q8IWA6 550 aaPredicted RBP19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MREGQ8N565 214 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 METTL13Q8N6R0 699 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 DCPSQ96C86 337 aaKnown RBP19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 RPS6KC1Q96S38 1066 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 DHX33Q9H6R0 707 aaKnown RBP19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 XPNPEP1Q9NQW7 623 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZNF302Q9NR11 478 aa19.13■□□□□ 0.65
HLA-DQB1-204ENST00000399084 TMEM150BA6NC51 233 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 TMCO5BA8MYB1 307 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CXCL11O14625 94 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HNRNPDLO14979 420 aaKnown RBP19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 EXTL3O43909 919 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CEP104O60308 925 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SLC25A27O95847 323 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 OATP04181 439 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ADRB2P07550 413 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HSPA6P17066 643 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 EDNRBP24530 442 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 NAMPTP43490 491 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 IREB2P48200 963 aaKnown RBP19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MAATS1Q7Z4T9 603 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CBWD2Q8IUF1 395 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CCDC26Q8TAB7 109 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PLEKHO2Q8TD55 490 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PORCNQ9H237 461 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 RAB20Q9NX57 234 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ARID2Q68CP9 1835 aa19.12■□□□□ 0.65
HLA-DQB1-204ENST00000399084 TISP43B9A030 160 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ALDH5A1P51649 535 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 POLGP54098 1239 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 BPIFB4P59827 614 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 VGLL4Q14135 290 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PRAMEF18Q5VWM3 479 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 FAM160B1Q5W0V3 765 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ARHGEF19Q8IW93 802 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HDAC7Q8WUI4 952 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 BSNDQ8WZ55 320 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 TMEM134Q9H6X4 195 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZCCHC17Q9NP64 241 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CCDC66A2RUB6 948 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GOLGA6BA6NDN3 693 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 A6NNZ2 444 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 IRF6O14896 467 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GAS2O43903 313 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 BUB1BO60566 1050 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZMYND10O75800 440 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HEXIM1O94992 359 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 FTLP02792 175 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 EMC2Q15006 297 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 TUBB8Q3ZCM7 444 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PPP1R2P3Q6NXS1 205 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZNF677Q86XU0 584 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SULF1Q8IWU6 871 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 AFAP1L1Q8TED9 768 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SLC7A3Q8WY07 619 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 FAM167AQ96KS9 214 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 KRT12Q99456 494 aa19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 POLR3FQ9H1D9 316 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MYBL2P10244 700 aa19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PRPF4BQ13523 1007 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms