RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.93□□□□□ -0.82
ATL3-201ENST00000398868 PAGE5Q96GU1 130 aa9.93□□□□□ -0.82
ATL3-201ENST00000398868 APOL5Q9BWW9 433 aa9.93□□□□□ -0.82
ATL3-201ENST00000398868 ATP11BQ9Y2G3 1177 aa9.93□□□□□ -0.82
ATL3-201ENST00000398868 PCDHA13Q9Y5I0 950 aa9.93□□□□□ -0.82
ATL3-201ENST00000398868 PTPRTO14522 1441 aa9.93□□□□□ -0.82
ATL3-201ENST00000398868 BIVM-ERCC5R4GMW8 1640 aa9.93□□□□□ -0.82
ATL3-201ENST00000398868 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ANP32DO95626 131 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 TRPC1P48995 793 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 LINC00116Q8NCU8 138 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CERKQ8TCT0 537 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 FAM136AQ96C01 138 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 VMP1Q96GC9 406 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 LXNQ9BS40 222 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 DHX35Q9H5Z1 703 aaKnown RBP9.92□□□□□ -0.82
ATL3-201ENST00000398868 ADA2Q9NZK5 511 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 STX18Q9P2W9 335 aaKnown RBP9.92□□□□□ -0.82
ATL3-201ENST00000398868 USP27XA6NNY8 438 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ZSCAN9O15535 394 aaPredicted RBP9.92□□□□□ -0.82
ATL3-201ENST00000398868 ADCY3O60266 1144 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 PGK2P07205 417 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 MYBL1P10243 752 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CMA1P23946 247 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 PHKA2P46019 1235 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 SLC30A5Q8TAD4 765 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CCDC124Q96CT7 223 aaKnown RBP9.92□□□□□ -0.82
ATL3-201ENST00000398868 SCP2P22307 547 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 C6orf118Q5T5N4 469 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ICA1LQ8NDH6 482 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 OR6P1Q8NGX9 317 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CASS4Q9NQ75 786 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 FEM1BQ9UK73 627 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 PRG3Q9Y2Y8 225 aaPredicted RBP9.92□□□□□ -0.82
ATL3-201ENST00000398868 RASSF10A6NK89 507 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 SNX2O60749 519 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ECEL1O95672 775 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 HS6ST3Q8IZP7 471 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CDHR1Q96JP9 859 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 VPS11Q9H270 941 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ATP10DQ9P241 1426 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CCDC85CA6NKD9 419 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 PRELPP51888 382 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 FAM160B2Q86V87 743 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ZFYVE19Q96K21 471 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 MUC3BQ9H195 1237 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 KCNG1Q9UIX4 513 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 UBE4BO95155 1302 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 ESYT3A0FGR9 886 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 CDC25BP30305 580 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 KIAA1755Q5JYT7 1200 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 TMEM154Q6P9G4 183 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 SPATA2LQ8IUW3 424 aaPredicted RBP9.92□□□□□ -0.82
ATL3-201ENST00000398868 BEST2Q8NFU1 509 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 TMEM206Q9H813 350 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
ATL3-201ENST00000398868 TMPRSS15P98073 1019 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 DR1Q01658 176 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 GUCY1A3Q02108 690 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 APBA1Q02410 837 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 KRT17Q04695 432 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 DYNC1I2Q13409 638 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 HEATR4Q86WZ0 1026 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 FOXP4Q8IVH2 680 aaPredicted RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 ENTPD7Q9NQZ7 604 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 CPA4Q9UI42 421 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 TRAF3IP3Q9Y228 551 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 ZBTB5O15062 677 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 ARL4DP49703 201 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 BAATQ14032 418 aaPredicted RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 ZNF658Q5TYW1 1059 aaPredicted RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 KIRREL3Q8IZU9 778 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 EFHBQ8N7U6 833 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 SERPINI1Q99574 410 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 KIFC3Q9BVG8 833 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 PCDHB7Q9Y5E2 793 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 ZMYM4Q5VZL5 1548 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 NCK2O43639 380 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 TBC1D12O60347 775 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 CIAO1O76071 339 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 DMPKQ09013 629 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 SRLQ86TD4 932 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 HDAC6Q9UBN7 1215 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 PZPP20742 1482 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 EFCAB6Q5THR3 1501 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 PPP3CCP48454 512 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 RPS6P62753 249 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 NSUN6Q8TEA1 469 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 CALR3Q96L12 384 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 FAM49BQ9NUQ9 324 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 KIF17Q9P2E2 1029 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 TEKT2Q9UIF3 430 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 DNAJC12Q9UKB3 198 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 KDM5DQ9BY66 1539 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms