RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 HP1BP3Q5SSJ5 553 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 INTS5Q6P9B9 1019 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 CCDC137Q6PK04 289 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 ZDHHC24Q6UX98 284 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 TBC1D22AQ8WUA7 517 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 ELMO3Q96BJ8 720 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 OSBPL1AQ9BXW6 950 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 BSDC1Q9NW68 430 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 RASAL2Q9UJF2 1139 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 RPTORQ8N122 1335 aa10.63□□□□□ -0.71
PTCHD4-202ENST00000398738 CFAP73A6NFT4 308 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 MED24O75448 989 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TAL1P17542 331 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 MAPK7Q13164 816 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 AUHQ13825 339 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ITIH4Q14624 930 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 PARP10Q53GL7 1025 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SRRM1Q8IYB3 904 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 C1orf54Q8WWF1 131 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ACP6Q9NPH0 428 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ASIC3Q9UHC3 531 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 DNAJC12Q9UKB3 198 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ALG6Q9Y672 507 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 BZW2Q9Y6E2 419 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 CALRP27797 417 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 CTTNQ14247 550 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TBC1D10BQ4KMP7 808 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ZC2HC1CQ53FD0 456 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 COBLL1Q53SF7 1204 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 PRR16Q569H4 304 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TTC27Q6P3X3 843 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TAOK1Q7L7X3 1001 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SPATA21Q7Z572 469 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 LONP2Q86WA8 852 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 MXD3Q9BW11 206 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SPZ1Q9BXG8 430 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 HOMER3Q9NSC5 361 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ADAM22Q9P0K1 906 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 NKX1-2Q9UD57 310 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TNS2Q63HR2 1409 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 HIP1RO75146 1068 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SMIM24O75264 130 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 BAG3O95817 575 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 NR3C1P04150 777 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SKIP12755 728 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 BRAFP15056 766 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TARSP26639 723 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 SERPINB4P48594 390 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 IRX1P78414 480 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 POU5F1Q01860 360 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ZNF268Q14587 947 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 COG2Q14746 738 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 KYNUQ16719 465 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 ARSHQ5FYA8 562 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 C10orf76Q5T2E6 689 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 AP1ARQ63HQ0 302 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 PIGOQ8TEQ8 1089 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 TGS1Q96RS0 853 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 COG5Q9UP83 839 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 STXBP5LQ9Y2K9 1186 aa10.62□□□□□ -0.71
PTCHD4-202ENST00000398738 PLCH1Q4KWH8 1693 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 AFF2P51816 1311 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 TIAM2Q8IVF5 1701 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 RIPK2O43353 540 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 SPAG7O75391 227 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 AGTP01019 485 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 RAD23BP54727 409 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 ADCY2Q08462 1091 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 PDIA5Q14554 519 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 KNOP1Q1ED39 458 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 TMEM119Q4V9L6 283 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 PRUNE1Q86TP1 453 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 RASGEF1CQ8N431 466 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 PRELID2Q8N945 189 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 SLC20A1Q8WUM9 679 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 RFFLQ8WZ73 363 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 PGM2Q96G03 612 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 IFT74Q96LB3 600 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 REEP2Q9BRK0 252 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 BHMT2Q9H2M3 363 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 PCDHB3Q9Y5E6 796 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 HRO43593 1189 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 CHMP2AO43633 222 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 SPOPO43791 374 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 GSTA1P08263 222 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 CCND1P24385 295 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 RAB15P59190 212 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 CALCOCO2Q13137 446 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 LYPD8Q6UX82 237 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms