RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CCDC78A2IDD5 438 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 CCZ1BP86790 482 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 CCZ1P86791 482 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 E2F5Q15329 346 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 DUOXA2Q1HG44 320 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 CENPUQ71F23 418 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 GUF1Q8N442 669 aaKnown RBP12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 OR6P1Q8NGX9 317 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 KLHL29Q96CT2 875 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 FUCA2Q9BTY2 467 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 BCAP29Q9UHQ4 241 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 SLC8A2Q9UPR5 921 aa12.3□□□□□ -0.44
PCDHGA8-201ENST00000398604 GON4LQ3T8J9 2241 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 PDGFRBP09619 1106 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 GYS1P13807 737 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 HSPA6P17066 643 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 YWHABP31946 246 aaKnown RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 PDCD7Q8N8D1 485 aaKnown RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 SLC30A5Q8TAD4 765 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 DEPDC1BQ8WUY9 529 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 MAML1Q92585 1016 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 AGBL1Q96MI9 1066 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 VPS11Q9H270 941 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 KIAA1586Q9HCI6 787 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 INTUQ9ULD6 942 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 CYP26A1O43174 497 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 TJP3O95049 919 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 ABCD1P33897 745 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 RGS7P49802 495 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 POU5F1BQ06416 359 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 MFSD14CQ5VZR4 134 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 E4F1Q66K89 784 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 ZNF280CQ8ND82 737 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 TRIM9Q9C026 710 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 ZCCHC17Q9NP64 241 aaKnown RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 CEP72Q9P209 647 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 KRT3P12035 628 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 PLS3P13797 630 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 CIITAP33076 1130 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 USP11P51784 963 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 ATP2C1P98194 919 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 PDE1CQ14123 709 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 EPHA7Q15375 998 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 ANGPTL8Q6UXH0 198 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 LCA5Q86VQ0 697 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 LRRC71Q8N4P6 559 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 NUP85Q9BW27 656 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 EDEM3Q9BZQ6 932 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 AGAP1Q9UPQ3 857 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
PCDHGA8-201ENST00000398604 ATP8B3O60423 1300 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 DPYSL4O14531 572 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 BCAR1P56945 870 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 STK4Q13043 487 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 SRRM1Q8IYB3 904 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 ZNF564Q8TBZ8 553 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 EIF3CQ99613 913 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 FSD1LQ9BXM9 530 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 KLHL11Q9NVR0 708 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 RNF14Q9UBS8 474 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 SYNDIG1LA6NDD5 238 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 RASA1P20936 1047 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 TNFAIP2Q03169 654 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 TFDP2Q14188 446 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 SZRD1Q7Z422 152 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 FBXL13Q8NEE6 735 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 OR6J1Q8NGC5 347 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 ATG4CQ96DT6 458 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 SUCLA2Q9P2R7 463 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 UBE2Q2LH0YL09 131 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 MAP7Q14244 749 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 DCAF4L1Q3SXM0 396 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 ZC2HC1CQ53FD0 456 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 CNTRLQ7Z7A1 2325 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 CEP120Q8N960 986 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 C1orf54Q8WWF1 131 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 ZKSCAN4Q969J2 545 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 LRGUKQ96M69 825 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 INTS2Q9H0H0 1204 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 NOC2LQ9Y3T9 749 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 GNGT2O14610 69 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 SMIM24O75264 130 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 LCP1P13796 627 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 FDPSP14324 419 aaKnown RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 NFIAQ12857 509 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 COL23A1Q86Y22 540 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 RNF135Q8IUD6 432 aa12.28□□□□□ -0.44
PCDHGA8-201ENST00000398604 PROM2Q8N271 834 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms