RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ZNF668Q96K58 619 aaPredicted RBP15.55■□□□□ 0.08
SKA1-202ENST00000398452 PRIMPOLQ96LW4 560 aa15.55■□□□□ 0.08
SKA1-202ENST00000398452 STRA6Q9BX79 667 aa15.55■□□□□ 0.08
SKA1-202ENST00000398452 TRIM5Q9C035 493 aa15.55■□□□□ 0.08
SKA1-202ENST00000398452 SENP6Q9GZR1 1112 aaPredicted RBP15.55■□□□□ 0.08
SKA1-202ENST00000398452 KCTD10Q9H3F6 313 aa15.55■□□□□ 0.08
SKA1-202ENST00000398452 C11orf49Q9H6J7 331 aa15.55■□□□□ 0.08
SKA1-202ENST00000398452 ADGRA3Q8IWK6 1321 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 KIAA0391O15091 583 aaKnown RBP15.54■□□□□ 0.08
SKA1-202ENST00000398452 CLIC2O15247 247 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 EXOC3O60645 756 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 EEF1GP26641 437 aaKnown RBP15.54■□□□□ 0.08
SKA1-202ENST00000398452 MTIF2P46199 727 aaKnown RBP15.54■□□□□ 0.08
SKA1-202ENST00000398452 PMS1P54277 932 aaKnown RBP15.54■□□□□ 0.08
SKA1-202ENST00000398452 MRPS6P82932 125 aaKnown RBP15.54■□□□□ 0.08
SKA1-202ENST00000398452 MYBPC2Q14324 1141 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 NCAPHQ15003 741 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 KIZQ2M2Z5 673 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 CEP135Q66GS9 1140 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 RUFY4Q6ZNE9 571 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 SERINC5Q86VE9 423 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 KCNN1Q92952 543 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 AGPAT3Q9NRZ7 376 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 TRPV2Q9Y5S1 764 aa15.54■□□□□ 0.08
SKA1-202ENST00000398452 SCN10AQ9Y5Y9 1956 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 KCNJ18B7U540 433 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 TULP1O00294 542 aaPredicted RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 PES1O00541 588 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 ACKR2O00590 384 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 CAND2O75155 1236 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 LDHAP00338 332 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 PSMC2P35998 433 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 THPOP40225 353 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 CYP2J2P51589 502 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 CRYBB1P53674 252 aaPredicted RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 KCNA1Q09470 495 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 KCNJ12Q14500 433 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 NFIL3Q16649 462 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 HSP90AA4PQ58FG1 418 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 ZPBP2Q6X784 338 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 FILIP1Q7Z7B0 1213 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 USP37Q86T82 979 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 CNOT6LQ96LI5 555 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 DUSP9Q99956 384 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 ADPGKQ9BRR6 497 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 METTL14Q9HCE5 456 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 SAMSN1Q9NSI8 373 aaKnown RBP15.53■□□□□ 0.08
SKA1-202ENST00000398452 ALPK3Q96L96 1907 aa15.53■□□□□ 0.08
SKA1-202ENST00000398452 SLC16A3O15427 465 aaKnown RBP15.52■□□□□ 0.08
SKA1-202ENST00000398452 CLDN3O15551 220 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 KRT13P13646 458 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 GARTP22102 1010 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 BFSP2Q13515 415 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 ZCWPW2Q504Y3 356 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 RPAINQ86UA6 219 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 XXYLT1Q8NBI6 393 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 OSMRQ99650 979 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.08
SKA1-202ENST00000398452 KIAA1586Q9HCI6 787 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 TRMT13Q9NUP7 481 aaKnown RBP15.52■□□□□ 0.08
SKA1-202ENST00000398452 ANKFY1Q9P2R3 1169 aa15.52■□□□□ 0.08
SKA1-202ENST00000398452 ZMYM2Q9UBW7 1377 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 GRIN2DO15399 1336 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 DCDC2CA8MYV0 355 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 TGFB1I1O43294 461 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 TOM1L1O75674 476 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 PIGRP01833 764 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 CTSHP09668 335 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
SKA1-202ENST00000398452 DARSP14868 501 aaKnown RBP15.51■□□□□ 0.07
SKA1-202ENST00000398452 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
SKA1-202ENST00000398452 HOXD13P35453 343 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 UBASH3AP57075 661 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 FANCCQ00597 558 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 MBTD1Q05BQ5 628 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 HIC1Q14526 733 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 FAM187BQ17R55 369 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 TCP11X2Q5H9J9 407 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 ATF7IP2Q5U623 682 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 SLC9A9Q8IVB4 645 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 C12orf56Q8IXR9 622 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 SLC43A3Q8NBI5 491 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 MKNK1Q9BUB5 465 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 MSTO1Q9BUK6 570 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 TARS2Q9BW92 718 aaKnown RBP15.51■□□□□ 0.07
SKA1-202ENST00000398452 TMEM121BQ9BXQ6 578 aaPredicted RBP15.51■□□□□ 0.07
SKA1-202ENST00000398452 CCDC113Q9H0I3 377 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 FZD8Q9H461 694 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 PCIF1Q9H4Z3 704 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 IFT122Q9HBG6 1241 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 HSPBP1Q9NZL4 362 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 ARMCX3Q9UH62 379 aaPredicted RBP15.51■□□□□ 0.07
SKA1-202ENST00000398452 CDY2AQ9Y6F7 541 aa15.51■□□□□ 0.07
SKA1-202ENST00000398452 EVPLQ92817 2033 aa15.5■□□□□ 0.07
SKA1-202ENST00000398452 GOLGA6L6A8MZA4 724 aa15.5■□□□□ 0.07
SKA1-202ENST00000398452 N4BP3O15049 544 aa15.5■□□□□ 0.07
SKA1-202ENST00000398452 B4GALT4O60513 344 aa15.5■□□□□ 0.07
SKA1-202ENST00000398452 GPR32O75388 356 aa15.5■□□□□ 0.07
SKA1-202ENST00000398452 RPS6KA5O75582 802 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms