RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MEI1Q5TIA1 1274 aa11.78□□□□□ -0.52
HPS4-202ENST00000398145 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
HPS4-202ENST00000398145 SH3RF1Q7Z6J0 888 aa11.78□□□□□ -0.52
HPS4-202ENST00000398145 LARGE2Q8N3Y3 721 aa11.78□□□□□ -0.52
HPS4-202ENST00000398145 CCDC22O60826 627 aa11.77□□□□□ -0.52
HPS4-202ENST00000398145 LONP2Q86WA8 852 aa11.77□□□□□ -0.52
HPS4-202ENST00000398145 DNAJC9Q8WXX5 260 aa11.77□□□□□ -0.52
HPS4-202ENST00000398145 PDE2AO00408 941 aaPredicted RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 TLR3O15455 904 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 CYP26A1O43174 497 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 CAND2O75155 1236 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 NQO1P15559 274 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 PGM1P36871 562 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 PASD1Q8IV76 773 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 ZWILCHQ9H900 591 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 SEPT10Q9P0V9 454 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 NXF1Q9UBU9 619 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 MED7O43513 233 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 LPXNO60711 386 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 COMTP21964 271 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 PSMA2P25787 234 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 EPHB1P54762 984 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 DEUP1Q05D60 604 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 EARS2Q5JPH6 523 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 ZNF34Q8IZ26 560 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
HPS4-202ENST00000398145 FBXO25Q8TCJ0 367 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 OLFM3Q96PB7 478 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 NRBP2Q9NSY0 501 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 DONSONQ9NYP3 566 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 RGL1Q9NZL6 768 aa11.77□□□□□ -0.53
HPS4-202ENST00000398145 ESYT2A0FGR8 921 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 NVLO15381 856 aaKnown RBP11.76□□□□□ -0.53
HPS4-202ENST00000398145 SORBS3O60504 671 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FAM153BP0C7A2 387 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 COPB2P35606 906 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FAM153CQ494X1 144 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ENOSF1Q7L5Y1 443 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 SUPT20HQ8NEM7 779 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 DTX3LQ8TDB6 740 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FAM153AQ9UHL3 310 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 WDR64B1ANS9 1081 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 CFLARO15519 480 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 DNAJC8O75937 253 aaPredicted RBP11.76□□□□□ -0.53
HPS4-202ENST00000398145 MYBL1P10243 752 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ECE1P42892 770 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 SLC1A1P43005 524 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ARSEP51690 589 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 TMED1Q13445 227 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 TMEM270Q6UE05 265 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 RAPH1Q70E73 1250 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FBXL13Q8NEE6 735 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FAF2Q96CS3 445 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 SERPINB12Q96P63 405 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 PFDN4Q9NQP4 134 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 K7ERI5 159 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 SLC16A4O15374 487 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 PPIP5K2O43314 1243 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 AKR1B1P15121 316 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 MARK3P27448 753 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 CASP7P55210 303 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 GRB10Q13322 594 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ART3Q13508 389 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 PPM1NQ8N819 430 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 FAM96AQ9H5X1 160 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 PPLO60437 1756 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ARHGEF28Q8N1W1 1705 aaKnown RBP11.76□□□□□ -0.53
HPS4-202ENST00000398145 SLC26A4O43511 780 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 TFDP2Q14188 446 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 HIF1AQ16665 826 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 RCSD1Q6JBY9 416 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 CNPY4Q8N129 248 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 C4orf33Q8N1A6 199 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 MKNK1Q9BUB5 465 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 ATP6V0A4Q9HBG4 840 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 SMYD2Q9NRG4 433 aa11.76□□□□□ -0.53
HPS4-202ENST00000398145 TCHHQ07283 1943 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 MYBP10242 640 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 GHRP10912 638 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 PDHBP11177 359 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 RARGP13631 454 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 SMARCA1P28370 1054 aa11.75□□□□□ -0.53
HPS4-202ENST00000398145 TMEM154Q6P9G4 183 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms