RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 GOLGA8FQ08AF8 430 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 GOLGA8DPQ0D2H9 430 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 LAMTOR4Q0VGL1 99 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 MYBPC2Q14324 1141 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 KIZQ2M2Z5 673 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 SCYL2Q6P3W7 929 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 RSRC2Q7L4I2 434 aaKnown RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 PLPPR4Q7Z2D5 763 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 SRGAP1Q7Z6B7 1085 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 SIX6OS1Q8N1H7 587 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 BLOC1S4Q9NUP1 217 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 RAB20Q9NX57 234 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ADAMTS1Q9UHI8 967 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 DIS3Q9Y2L1 958 aaKnown RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 TEX33O43247 280 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ETF1P62495 437 aaKnown RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 FSTL1Q12841 308 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 DNAJC24Q6P3W2 148 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 SIAH1Q8IUQ4 282 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 KSR1Q8IVT5 923 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 LBHD1Q9BQE6 289 aaPredicted RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ABHD10Q9NUJ1 306 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 FEZ2Q9UHY8 353 aaPredicted RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 SAR1BQ9Y6B6 198 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 LRRC53A6NM62 1247 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 BUB1O43683 1085 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ATP9AO75110 1047 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 DRAP1Q14919 205 aaPredicted RBP8.9□□□□□ -0.98
PTPRD-204ENST00000397606 SGSM1Q2NKQ1 1148 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 DUSP28Q4G0W2 176 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF394Q53GI3 561 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF365Q70YC5 407 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 CD302Q8IX05 232 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 CCDC113Q9H0I3 377 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 MYH2Q9UKX2 1941 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 VTNP04004 478 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 TCP1P17987 556 aaKnown RBP8.9□□□□□ -0.99
PTPRD-204ENST00000397606 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.99
PTPRD-204ENST00000397606 VAV2P52735 878 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 MPZL3Q6UWV2 235 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 C17orf53Q8N3J3 647 aaPredicted RBP8.9□□□□□ -0.99
PTPRD-204ENST00000397606 COPS5Q92905 334 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 TMEM8AQ9HCN3 771 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 ZCCHC17Q9NP64 241 aaKnown RBP8.9□□□□□ -0.99
PTPRD-204ENST00000397606 MTRF1LQ9UGC7 380 aaKnown RBP8.9□□□□□ -0.99
PTPRD-204ENST00000397606 DDX41Q9UJV9 622 aaKnown RBP8.9□□□□□ -0.99
PTPRD-204ENST00000397606 AGAP1Q9UPQ3 857 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 HYOU1Q9Y4L1 999 aa8.9□□□□□ -0.99
PTPRD-204ENST00000397606 NRCAMQ92823 1304 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 MYZAPP0CAP1 466 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 NCOA4Q13772 614 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 E2F4Q16254 413 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 WDR72Q3MJ13 1102 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 CENPPQ6IPU0 288 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 ERICH1Q86X53 443 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 MAP7D3Q8IWC1 876 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 HSD17B14Q9BPX1 270 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 HAUS2Q9NVX0 235 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 A0A087WZ62 844 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 FAM170AA1A519 330 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
PTPRD-204ENST00000397606 SLC12A3P55017 1021 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 KRT81Q14533 505 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 PRAMEF19Q5SWL8 479 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 LMBRD2Q68DH5 695 aaPredicted RBP8.89□□□□□ -0.99
PTPRD-204ENST00000397606 FDXACB1Q9BRP7 624 aaPredicted RBP8.89□□□□□ -0.99
PTPRD-204ENST00000397606 SCINQ9Y6U3 715 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 TTC26A0AVF1 554 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 GOLGA8SH3BPF8 625 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 NPTXRO95502 500 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 HMGCRP04035 888 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 ACTN1P12814 892 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 PRMT2P55345 433 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 ZNF410Q86VK4 478 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 SCFD1Q8WVM8 642 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 RPGRIP1Q96KN7 1286 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 TNIP3Q96KP6 325 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 PSMB7Q99436 277 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 SOWAHDA6NJG2 315 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 MESDQ14696 234 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 PPP2R5EQ16537 467 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 NT5DC1Q5TFE4 455 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 OR6B2Q6IFH4 312 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 C8orf74Q6P047 294 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 PDZD4Q76G19 769 aaPredicted RBP8.89□□□□□ -0.99
PTPRD-204ENST00000397606 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 MICAL1Q8TDZ2 1067 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 NSMCE1Q8WV22 266 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 CCDC77Q9BR77 488 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 APEX2Q9UBZ4 518 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 IKBKGQ9Y6K9 419 aa8.89□□□□□ -0.99
PTPRD-204ENST00000397606 A0A087X0B3 334 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 A8MXQ7 604 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 LYPLA2O95372 231 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ICAM3P32942 547 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 MRPS9P82933 396 aaKnown RBP8.88□□□□□ -0.99
PTPRD-204ENST00000397606 BEX3Q00994 111 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms