RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PRMT7Q9NVM4 692 aaPredicted RBP30.03■■■□□ 2.4
CPNE1-203ENST00000397442 PHF24Q9UPV7 400 aa30.03■■■□□ 2.4
CPNE1-203ENST00000397442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.03■■■□□ 2.4
CPNE1-203ENST00000397442 A0A1W2PQ45 241 aaPredicted RBP30.02■■■□□ 2.4
CPNE1-203ENST00000397442 A0A1W2PQY0 241 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 ABLIM1O14639 778 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 MAPK13O15264 365 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 TPM2P07951 284 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 TMC6Q7Z403 805 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 SRGAP1Q7Z6B7 1085 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 NME8Q8N427 588 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 RDH13Q8NBN7 331 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 RNF208Q9H0X6 261 aa30.02■■■□□ 2.4
CPNE1-203ENST00000397442 A0A0B4J269 797 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 GOLGA8IPA6NC78 632 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 GOLGA8JA6NMD2 632 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 PRPF4BQ13523 1007 aaKnown RBP30.01■■■□□ 2.4
CPNE1-203ENST00000397442 SLFN12LQ6IEE8 588 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 FBXO46Q6PJ61 603 aaPredicted RBP30.01■■■□□ 2.4
CPNE1-203ENST00000397442 TSHZ1Q6ZSZ6 1077 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 WNT8BQ93098 351 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 SLC35C1Q96A29 364 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 VTI1AQ96AJ9 217 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 SCLT1Q96NL6 688 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 PTPRHQ9HD43 1115 aa30.01■■■□□ 2.4
CPNE1-203ENST00000397442 PES1O00541 588 aaKnown RBP30.01■■■□□ 2.39
CPNE1-203ENST00000397442 TOM1L1O75674 476 aa30.01■■■□□ 2.39
CPNE1-203ENST00000397442 ADRB2P07550 413 aa30.01■■■□□ 2.39
CPNE1-203ENST00000397442 HSPA1AP0DMV8 641 aaKnown RBP30.01■■■□□ 2.39
CPNE1-203ENST00000397442 HSPA1BP0DMV9 641 aaKnown RBP30.01■■■□□ 2.39
CPNE1-203ENST00000397442 PROZP22891 400 aa30.01■■■□□ 2.39
CPNE1-203ENST00000397442 MCCD1P59942 119 aaPredicted RBP30.01■■■□□ 2.39
CPNE1-203ENST00000397442 CBWD2Q8IUF1 395 aa30.01■■■□□ 2.39
CPNE1-203ENST00000397442 ANKFY1Q9P2R3 1169 aa30.01■■■□□ 2.39
CPNE1-203ENST00000397442 PTPN11Q06124 597 aaPredicted RBP30■■■□□ 2.39
CPNE1-203ENST00000397442 SNRNP35Q16560 246 aaKnown RBP30■■■□□ 2.39
CPNE1-203ENST00000397442 GPD1LQ8N335 351 aa30■■■□□ 2.39
CPNE1-203ENST00000397442 PRIMPOLQ96LW4 560 aa30■■■□□ 2.39
CPNE1-203ENST00000397442 OSMRQ99650 979 aa30■■■□□ 2.39
CPNE1-203ENST00000397442 OGDHLQ9ULD0 1010 aa30■■■□□ 2.39
CPNE1-203ENST00000397442 CNTNAP2Q9UHC6 1331 aa29.99■■■□□ 2.39
CPNE1-203ENST00000397442 ATF7IP2Q5U623 682 aa29.99■■■□□ 2.39
CPNE1-203ENST00000397442 SPECC1LQ69YQ0 1117 aa29.99■■■□□ 2.39
CPNE1-203ENST00000397442 SLC43A3Q8NBI5 491 aa29.99■■■□□ 2.39
CPNE1-203ENST00000397442 GCOM2Q9BZD3 368 aaPredicted RBP29.99■■■□□ 2.39
CPNE1-203ENST00000397442 AGO2Q9UKV8 859 aaKnown RBP29.99■■■□□ 2.39
CPNE1-203ENST00000397442 GINS2Q9Y248 185 aa29.99■■■□□ 2.39
CPNE1-203ENST00000397442 A0A1W2PQC6 194 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 KBTBD13C9JR72 458 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 DNM1LO00429 736 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 KIAA0391O15091 583 aaKnown RBP29.98■■■□□ 2.39
CPNE1-203ENST00000397442 DARSP14868 501 aaKnown RBP29.98■■■□□ 2.39
CPNE1-203ENST00000397442 CTCFP49711 727 aaPredicted RBP29.98■■■□□ 2.39
CPNE1-203ENST00000397442 PPP2R3AQ06190 1150 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 KCNH2Q12809 1159 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 PTGISQ16647 500 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 ZNF710Q8N1W2 664 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 ZNF333Q96JL9 665 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 ERGIC2Q96RQ1 377 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 TNFSF13BQ9Y275 285 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 CLDN3O15551 220 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 BFSP1Q12934 665 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 TBX2Q13207 712 aaPredicted RBP29.98■■■□□ 2.39
CPNE1-203ENST00000397442 DCAF17Q5H9S7 520 aaPredicted RBP29.98■■■□□ 2.39
CPNE1-203ENST00000397442 INTS8Q75QN2 995 aaKnown RBP29.98■■■□□ 2.39
CPNE1-203ENST00000397442 RPAINQ86UA6 219 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 CCDC155Q8N6L0 562 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 PLEKHO2Q8TD55 490 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 TMEM40Q8WWA1 233 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 MSTO1Q9BUK6 570 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 IMPACTQ9P2X3 320 aa29.98■■■□□ 2.39
CPNE1-203ENST00000397442 ITIH6Q6UXX5 1313 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 EXTL3O43909 919 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 FAM189A1O60320 539 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 TSPAN1O60635 241 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 MCL1Q07820 350 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 EEF1DP3Q658K8 133 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 CRELD2Q6UXH1 353 aaPredicted RBP29.97■■■□□ 2.39
CPNE1-203ENST00000397442 MFSD14AQ96MC6 490 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 FAM213AQ9BRX8 229 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 STARD7Q9NQZ5 370 aa29.97■■■□□ 2.39
CPNE1-203ENST00000397442 TRMT13Q9NUP7 481 aaKnown RBP29.97■■■□□ 2.39
CPNE1-203ENST00000397442 ARF4P18085 180 aaPredicted RBP29.96■■■□□ 2.39
CPNE1-203ENST00000397442 FGFR4P22455 802 aa29.96■■■□□ 2.39
CPNE1-203ENST00000397442 EIF4BP23588 611 aaKnown RBP29.96■■■□□ 2.39
CPNE1-203ENST00000397442 SNX17Q15036 470 aa29.96■■■□□ 2.39
CPNE1-203ENST00000397442 FKBP15Q5T1M5 1219 aa29.96■■■□□ 2.39
CPNE1-203ENST00000397442 MPZL3Q6UWV2 235 aa29.96■■■□□ 2.39
CPNE1-203ENST00000397442 AFPP02771 609 aaKnown RBP29.95■■■□□ 2.39
CPNE1-203ENST00000397442 CRYBB1P53674 252 aaPredicted RBP29.95■■■□□ 2.39
CPNE1-203ENST00000397442 DLG4P78352 724 aa29.95■■■□□ 2.39
CPNE1-203ENST00000397442 MRPS6P82932 125 aaKnown RBP29.95■■■□□ 2.39
CPNE1-203ENST00000397442 ZBTB41Q5SVQ8 909 aa29.95■■■□□ 2.39
CPNE1-203ENST00000397442 C1orf220Q5T0J3 134 aa29.95■■■□□ 2.39
CPNE1-203ENST00000397442 TCERG1LQ5VWI1 586 aa29.95■■■□□ 2.39
CPNE1-203ENST00000397442 CCDC186Q7Z3E2 898 aa29.95■■■□□ 2.39
CPNE1-203ENST00000397442 CDR2LQ86X02 465 aaPredicted RBP29.95■■■□□ 2.39
CPNE1-203ENST00000397442 ARMC5Q96C12 935 aa29.95■■■□□ 2.39
CPNE1-203ENST00000397442 CELF4Q9BZC1 486 aaKnown RBP29.95■■■□□ 2.39
CPNE1-203ENST00000397442 KIAA1586Q9HCI6 787 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms