RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SYT10Q6XYQ8 523 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 STXBP4Q6ZWJ1 553 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 RNF149Q8NC42 400 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 GLIS3Q8NEA6 775 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 FIZ1Q96SL8 496 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 PPP1R16BQ96T49 567 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 NTPCRQ9BSD7 190 aaKnown RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 NUP58Q9BVL2 599 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
CAPN3-207ENST00000397200 CCDC175P0C221 793 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
CAPN3-207ENST00000397200 GPC3P51654 580 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 NLRP11P59045 1033 aaKnown RBP16.29■□□□□ 0.2
CAPN3-207ENST00000397200 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 ALCAMQ13740 583 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 C1orf53Q5VUE5 145 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 ZBTB8OSQ8IWT0 167 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 ZNF710Q8N1W2 664 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 CPLX3Q8WVH0 158 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
CAPN3-207ENST00000397200 TSG101Q99816 390 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 KIFC3Q9BVG8 833 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
CAPN3-207ENST00000397200 DNAH12Q6ZR08 3092 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 A0A1W2PQJ5 194 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 M0QZ92 97 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 FANCGO15287 622 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 KIF20AO95235 890 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 MYBP10242 640 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 ABCD1P33897 745 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 KRT9P35527 623 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 PHKA2P46019 1235 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
CAPN3-207ENST00000397200 CASP5P51878 434 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 MARSP56192 900 aaKnown RBP16.28■□□□□ 0.2
CAPN3-207ENST00000397200 SNX17Q15036 470 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 MEA1Q16626 185 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 MAN2A1Q16706 1144 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 RPAINQ86UA6 219 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 ZNF410Q86VK4 478 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 TMEM161BQ8NDZ6 487 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 WNT8BQ93098 351 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 ST6GALNAC4Q9H4F1 302 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
CAPN3-207ENST00000397200 SIP14410 1827 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 A0A087WZ62 844 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 DENND3A2RUS2 1198 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 SCP2P22307 547 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 THPOP40225 353 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 MRPS6P82932 125 aaKnown RBP16.27■□□□□ 0.2
CAPN3-207ENST00000397200 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 KIZQ2M2Z5 673 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 TRIM60Q495X7 471 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 VWA3BQ502W6 1294 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 ZC2HC1CQ53FD0 456 aaPredicted RBP16.27■□□□□ 0.2
CAPN3-207ENST00000397200 CDCA2Q69YH5 1023 aaPredicted RBP16.27■□□□□ 0.2
CAPN3-207ENST00000397200 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 EPM2AIP1Q7L775 607 aaPredicted RBP16.27■□□□□ 0.2
CAPN3-207ENST00000397200 ANKRD33Q7Z3H0 272 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 ABHD8Q96I13 439 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 TOX2Q96NM4 488 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 FDXACB1Q9BRP7 624 aaPredicted RBP16.27■□□□□ 0.2
CAPN3-207ENST00000397200 DESI2Q9BSY9 194 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 NOC4LQ9BVI4 516 aaKnown RBP16.27■□□□□ 0.2
CAPN3-207ENST00000397200 ARHGAP28Q9P2N2 729 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 GINS2Q9Y248 185 aa16.27■□□□□ 0.2
CAPN3-207ENST00000397200 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.19
CAPN3-207ENST00000397200 GPR32O75388 356 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 CD4P01730 458 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 EFNA5P52803 228 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 PTENP60484 403 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 GTF2BQ00403 316 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 OR8K1Q8NGG5 319 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 DHX38Q92620 1227 aaKnown RBP16.27■□□□□ 0.19
CAPN3-207ENST00000397200 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 GCOM2Q9BZD3 368 aaPredicted RBP16.27■□□□□ 0.19
CAPN3-207ENST00000397200 ADAMTS10Q9H324 1103 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 SIK3Q9Y2K2 1263 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.19
CAPN3-207ENST00000397200 UBE4BO95155 1302 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 K7ERI5 159 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 CAND2O75155 1236 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms