RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ATP8B3O60423 1300 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 A6NHS1 94 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 LUC7L3O95232 432 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 RPL21P46778 160 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 GPATCH4Q5T3I0 446 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 RFFLQ8WZ73 363 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 MYO3BQ8WXR4 1341 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 RIPK2O43353 540 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 EEF2P13639 858 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 CCNG1P51959 295 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 THEMIS2Q5TEJ8 643 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 SLFN12Q8IYM2 578 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 ERMNQ8TAM6 284 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 MOV10L1Q9BXT6 1211 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 ACP6Q9NPH0 428 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 MTRF1LQ9UGC7 380 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 ARL2BPQ9Y2Y0 163 aa25.79■■□□□ 1.72
CSNK1E-203ENST00000396832 FERP16591 822 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 RPL13P26373 211 aaKnown RBP25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 RPA1P27694 616 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 ZNF76P36508 570 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 KLHL33A6NCF5 533 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 MSH4O15457 936 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 FAM13AO94988 1023 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 PPATQ06203 517 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 FAM196AQ6ZSG2 479 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 LENG9Q96B70 501 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 NAF1Q96HR8 494 aaKnown RBP25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 RXFP1Q9HBX9 757 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 ZFATQ9P243 1243 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 UPP2O95045 317 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 GDF11O95390 407 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 PTGIRP43119 386 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 SPATA21Q7Z572 469 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 SLF2Q8IX21 1173 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 ELMO3Q96BJ8 720 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 BTBD6Q96KE9 485 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 OSBPL1AQ9BXW6 950 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 DNAJC17Q9NVM6 304 aaKnown RBP25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 ZMYM2Q9UBW7 1377 aa25.78■■□□□ 1.72
CSNK1E-203ENST00000396832 PLIN4Q96Q06 1357 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 GJB6O95452 261 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 EIF2AK1Q9BQI3 630 aaKnown RBP25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 TCRBV7S2A1N4TA0A589 114 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 TISP43B9A030 160 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 CREB1P16220 341 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 TNFAIP3P21580 790 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 KCNJ1P48048 391 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 FMO5P49326 533 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 SLFN13Q68D06 897 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 CTTNBP2NLQ9P2B4 639 aa25.77■■□□□ 1.72
CSNK1E-203ENST00000396832 ADAMTSL1Q8N6G6 1762 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 TMEM120BA0PK00 339 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 ANKRD63C9JTQ0 380 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 TRAPPC3LQ5T215 181 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 TRIM68Q6AZZ1 485 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 GPR88Q9GZN0 384 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 DNAJC18Q9H819 358 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 O00370 1275 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 ATP2B4P23634 1241 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 SLC30A5Q8TAD4 765 aa25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 METTL14Q9HCE5 456 aaKnown RBP25.76■■□□□ 1.71
CSNK1E-203ENST00000396832 ADCY1Q08828 1119 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 RINT1Q6NUQ1 792 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 RMDN2Q96LZ7 410 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 POP1Q99575 1024 aaKnown RBP25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 PCIF1Q9H4Z3 704 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 COL24A1Q17RW2 1714 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 KIF13BQ9NQT8 1826 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 MESDQ14696 234 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 LONRF1Q17RB8 773 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 MFSD5Q6N075 450 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 ZDHHC14Q8IZN3 488 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 ANKRD42Q8N9B4 389 aa25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 ARHGEF2Q92974 986 aaKnown RBP25.75■■□□□ 1.71
CSNK1E-203ENST00000396832 ANKRD33BA6NCL7 494 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 FOXN3O00409 490 aaPredicted RBP25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 PHF2O75151 1096 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 TMEM253P0C7T8 217 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 RARGP13631 454 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 VCAM1P19320 739 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 ATP4AP20648 1035 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 TTC27Q6P3X3 843 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 PLCD4Q9BRC7 762 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 INTS2Q9H0H0 1204 aaKnown RBP25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 PARP2Q9UGN5 583 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 USP21Q9UK80 565 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 ALG6Q9Y672 507 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 NCANO14594 1321 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 HIP1RO75146 1068 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 AP1G2O75843 785 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 PSMC2P35998 433 aaKnown RBP25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 FAM163AQ96GL9 167 aaPredicted RBP25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 TRIM7Q9C029 511 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 KCNK9Q9NPC2 374 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 NKX1-2Q9UD57 310 aaPredicted RBP25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 PRKAG3Q9UGI9 489 aa25.74■■□□□ 1.71
CSNK1E-203ENST00000396832 LMNB1P20700 586 aa25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 RBBP5Q15291 538 aaKnown RBP25.73■■□□□ 1.71
CSNK1E-203ENST00000396832 CDC42EP5Q6NZY7 148 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms