RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PSMC1P62191 440 aaKnown RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 DRAP1Q14919 205 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 SFR1Q86XK3 245 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 GANCQ8TET4 914 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 ULK4Q96C45 1275 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 EHD2Q9NZN4 543 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 STOML1Q9UBI4 398 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 ASB14A6NK59 587 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 GOLGA8MH3BSY2 632 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 HNRNPCL1O60812 293 aaKnown RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 LARGE1O95461 756 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 SNRPFP62306 86 aaKnown RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 BEND6Q5SZJ8 279 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 HIBCHQ6NVY1 386 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 RFFLQ8WZ73 363 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 OSBPL5Q9H0X9 879 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 HNRNPCL2B2RXH8 293 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 E2F6O75461 281 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 RAD51Q06609 339 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 GPS1Q13098 491 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 TRMT10CQ7L0Y3 403 aaKnown RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 DYDC2Q96IM9 177 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 PPP1R16BQ96T49 567 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 SP110Q9HB58 689 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 TJP2Q9UDY2 1190 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 IQCA1LA6NCM1 817 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 PDXKO00764 312 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 TADA3O75528 432 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 CYP19A1P11511 503 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 PIGHQ14442 188 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 VEPH1Q14D04 833 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 TBC1D1Q86TI0 1168 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 ELAC2Q9BQ52 826 aaKnown RBP5.79□□□□□ -1.48
VPS13C-204ENST00000395898 ING2Q9H160 280 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 DYRK4Q9NR20 520 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 CAPN11Q9UMQ6 739 aa5.79□□□□□ -1.48
VPS13C-204ENST00000395898 POTEB3A0JP26 581 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 POTEFA5A3E0 1075 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 POTECB2RU33 542 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 POTEIP0CG38 1075 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 RALAP11233 206 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 STILQ15468 1287 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 STRIP1Q5VSL9 837 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 POTEBQ6S5H4 581 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 POTEGQ6S5H5 508 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 POTEEQ6S8J3 1075 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 BRINP3Q76B58 766 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 TBC1D10CQ8IV04 446 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 SYNE4Q8N205 404 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 A0A0G2JND7 137 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 TRPA1O75762 1119 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PNMA6AP0CW24 399 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MAP3K10Q02779 954 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MKRN3Q13064 507 aaKnown RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 EFTUD2Q15029 972 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 HIF1AQ16665 826 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PDXDC1Q6P996 788 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CDC26Q8NHZ8 85 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 RNF146Q9NTX7 359 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 NOP53Q9NZM5 478 aaKnown RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CFLARO15519 480 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 BCAR1P56945 870 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MAPRE2Q15555 327 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 GRAMD1BQ3KR37 738 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CEP55Q53EZ4 464 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CDKL3Q8IVW4 592 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 WDR35Q9P2L0 1181 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 USP32Q8NFA0 1604 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PPP2R2AP63151 447 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 NME3Q13232 169 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ASAP3Q8TDY4 903 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 OTUB1Q96FW1 271 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 EPAS1Q99814 870 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PPCSQ9HAB8 311 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 SLC16A4O15374 487 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 BNIP3LO60238 219 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 EFCAB14O75071 495 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 EYA4O95677 639 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 SPP2Q13103 211 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 FAM102AQ5T9C2 384 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 GTF3C2Q8WUA4 911 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ASIC4Q96FT7 647 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF512BQ96KM6 892 aaPredicted RBP5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PRR36Q9H6K5 1346 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 YY1AP1Q9H869 796 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 BFARQ9NZS9 450 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 MYO3AQ8NEV4 1616 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 DNAJC6O75061 913 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 KRT16P08779 473 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 PTK2BQ14289 1009 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 EPHA7Q15375 998 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 KIF2CQ99661 725 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 ISCA1Q9BUE6 129 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CCSER1Q9C0I3 900 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 GTSE1Q9NYZ3 720 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 HACD3Q9P035 362 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 CYP27B1O15528 508 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 SNAP25P60880 206 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 COG2Q14746 738 aa5.78□□□□□ -1.48
VPS13C-204ENST00000395898 TEX2Q8IWB9 1127 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms