RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 E9PMD0 336 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MEIS2O14770 477 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 DHX34Q14147 1143 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TFDP2Q14188 446 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TAF1CQ15572 869 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF699Q32M78 642 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TRIM59Q8IWR1 403 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ATP8B4Q8TF62 1192 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PFDN4Q9NQP4 134 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PXMP2Q9NR77 195 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PARVAQ9NVD7 372 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RAB20Q9NX57 234 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NKIRAS1Q9NYS0 192 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FAM196BA6NMK8 535 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MTSS1O43312 755 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 EXTL3O43909 919 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ABCB4P21439 1286 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ARHGAP25P42331 645 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PRKG1Q13976 671 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PIGHQ14442 188 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NFIL3Q16649 462 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 C4orf22Q6V702 233 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 KLRG1Q96E93 195 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 EEF2KMTQ96G04 330 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FRMD8P1Q9BZ68 369 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 DDX4Q9NQI0 724 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SLC12A6Q9UHW9 1150 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FZD9O00144 591 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PCSK1P29120 753 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 AXLP30530 894 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CHRNA3P32297 505 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 LMAN1P49257 510 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CLK2P49760 499 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PGM5Q15124 567 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FAM110CQ1W6H9 321 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NAT9Q9BTE0 207 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PRDM16Q9HAZ2 1276 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 GTF3C4Q9UKN8 822 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 A0A1W2PRG0 241 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PPP1R3GB7ZBB8 358 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CEP104O60308 925 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SOX5P35711 763 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NOGQ13253 232 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NCAPHQ15003 741 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ACBD5Q5T8D3 534 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SYDE1Q6ZW31 735 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SAMD7Q7Z3H4 446 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MBOAT7Q96N66 472 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CARD6Q9BX69 1037 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 BRWD3Q6RI45 1802 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 A0A0A6YYK5 440 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MCF2LO15068 1137 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 DNAJC24Q6P3W2 148 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PDIK1LQ8N165 341 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FAM71BQ8TC56 605 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 MMS19Q96T76 1030 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 LRRC4Q9HBW1 653 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RGL1Q9NZL6 768 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ADAM22Q9P0K1 906 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ABT1Q9ULW3 272 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 NRCAMQ92823 1304 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TRIP12Q14669 1992 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SPDYE5A6NIY4 337 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 EVI5O60447 810 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ATICP31939 592 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 SERPINB6P35237 376 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ACTR2P61160 394 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 RASSF7Q02833 373 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CYFIP1Q7L576 1253 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZDHHC17Q8IUH5 632 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 C7orf31Q8N865 590 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FAM133AQ8N9E0 248 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 USP38Q8NB14 1042 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CPVLQ9H3G5 476 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 CYP26B1Q9NR63 512 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FAM198AQ9UFP1 575 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ZHX1Q9UKY1 873 aaPredicted RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 FOCADQ5VW36 1801 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 LRRC53A6NM62 1247 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 E7EVH7 732 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 TNPO2O14787 897 aaKnown RBP3.63□□□□□ -1.83
VPS13C-203ENST00000395896 OGTO15294 1046 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PTPRAP18433 802 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ST3GAL1Q11201 340 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ARHGAP44Q17R89 818 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 C7orf43Q8WVR3 580 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ATG4CQ96DT6 458 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 PHACTR1Q9C0D0 580 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 UBN1Q9NPG3 1134 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 ST7Q9NRC1 585 aa3.63□□□□□ -1.83
VPS13C-203ENST00000395896 H3BRB1 525 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CABYRO75952 493 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PARNO95453 639 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SRGAP2CP0DJJ0 459 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PRKCEQ02156 737 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 IQSEC1Q6DN90 963 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CATSPER4Q7RTX7 472 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ILDR1Q86SU0 546 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RHOT1Q8IXI2 618 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms