RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 GYS2P54840 703 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 ACTR2P61160 394 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 PRKCEQ02156 737 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 EAPPQ56P03 285 aaPredicted RBP20.13■□□□□ 0.81
SIL1-202ENST00000394817 SWSAP1Q6NVH7 229 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 IFT20Q8IY31 132 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 SLC35G2Q8TBE7 412 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 HES6Q96HZ4 224 aa20.13■□□□□ 0.81
SIL1-202ENST00000394817 TMCO5BA8MYB1 307 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 PGRMC1O00264 195 aaKnown RBP20.12■□□□□ 0.81
SIL1-202ENST00000394817 HEXIM1O94992 359 aaKnown RBP20.12■□□□□ 0.81
SIL1-202ENST00000394817 GLI1P08151 1106 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 PPATQ06203 517 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 NNTQ13423 1086 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SLC39A4Q6P5W5 647 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SND1Q7KZF4 910 aaKnown RBP eCLIP20.12■□□□□ 0.811e-6■■■■□ 24.3
SIL1-202ENST00000394817 PALB2Q86YC2 1186 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 RASGEF1CQ8N431 466 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 PARD3BQ8TEW8 1205 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SCFD2Q8WU76 684 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 KRT12Q99456 494 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 OSGEPQ9NPF4 335 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 XPNPEP1Q9NQW7 623 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SEPT9Q9UHD8 586 aaPredicted RBP20.12■□□□□ 0.81
SIL1-202ENST00000394817 COQ4Q9Y3A0 265 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 TELO2Q9Y4R8 837 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 ADGRA3Q8IWK6 1321 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 LRRC37A2A6NM11 1700 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 GLTPD2A6NH11 291 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 BUB1BO60566 1050 aaPredicted RBP20.12■□□□□ 0.81
SIL1-202ENST00000394817 IREB2P48200 963 aaKnown RBP20.12■□□□□ 0.81
SIL1-202ENST00000394817 TMC2Q8TDI7 906 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SLC20A1Q8WUM9 679 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SAAL1Q96ER3 474 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.12■□□□□ 0.811e-7■□□□□ 8.4
SIL1-202ENST00000394817 TMEM8AQ9HCN3 771 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 CYP26B1Q9NR63 512 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 TAS2R14Q9NYV8 317 aa20.12■□□□□ 0.81
SIL1-202ENST00000394817 SCN4AP35499 1836 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 CEP104O60308 925 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 RNF40O75150 1001 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 ABCB4P21439 1286 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 HADHBP55084 474 aaKnown RBP20.11■□□□□ 0.81
SIL1-202ENST00000394817 SOX10P56693 466 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 ENPEPQ07075 957 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 KRT39Q6A163 491 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 MIS18BP1Q6P0N0 1132 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 CHST13Q8NET6 341 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 DNERQ8NFT8 737 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 MFSD14AQ96MC6 490 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 ATP6V0A4Q9HBG4 840 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 SEPT11Q9NVA2 429 aaKnown RBP20.11■□□□□ 0.81
SIL1-202ENST00000394817 AMFRQ9UKV5 643 aa20.11■□□□□ 0.81
SIL1-202ENST00000394817 ZHX1Q9UKY1 873 aaPredicted RBP20.11■□□□□ 0.81
SIL1-202ENST00000394817 NOC2LQ9Y3T9 749 aaKnown RBP20.11■□□□□ 0.81
SIL1-202ENST00000394817 AGPSO00116 658 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 PEX10O60683 326 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 SUPT20HL2P0C7V6 817 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 ICAM3P32942 547 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 ABCD1P33897 745 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 RNASE9P60153 205 aaKnown RBP20.1■□□□□ 0.81
SIL1-202ENST00000394817 MAP2K1Q02750 393 aaPredicted RBP20.1■□□□□ 0.81
SIL1-202ENST00000394817 PAK2Q13177 524 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 FAM71AQ8IYT1 594 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 ARHGEF26Q96DR7 871 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 OTUD5Q96G74 571 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 THAP2Q9H0W7 228 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 ISCUQ9H1K1 167 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
SIL1-202ENST00000394817 ARHGAP28Q9P2N2 729 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 GOLGA6BA6NDN3 693 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 CLSTN1O94985 981 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 GTF2H1P32780 548 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 GGCXP38435 758 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 GPC3P51654 580 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 SP4Q02446 784 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 TTLL12Q14166 644 aaPredicted RBP20.1■□□□□ 0.81
SIL1-202ENST00000394817 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 PTPROQ16827 1216 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 BRDTQ58F21 947 aaPredicted RBP20.1■□□□□ 0.81
SIL1-202ENST00000394817 XKR3Q5GH77 459 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 USP37Q86T82 979 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 RHOT2Q8IXI1 618 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 ZC3H15Q8WU90 426 aaKnown RBP20.1■□□□□ 0.81
SIL1-202ENST00000394817 SHC3Q92529 594 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 SEMA4DQ92854 862 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 KAT5Q92993 513 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 ZBTB9Q96C00 473 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 KREMEN1Q96MU8 473 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 EPB41L5Q9HCM4 733 aa20.1■□□□□ 0.81
SIL1-202ENST00000394817 H0YCG3 227 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 IRF6O14896 467 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 RAD51CO43502 376 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 GARTP22102 1010 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 GUCY2DQ02846 1103 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 CYP24A1Q07973 514 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 STXBP2Q15833 593 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 EPS8L1Q8TE68 723 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 POMGNT1Q8WZA1 660 aa20.09■□□□□ 0.81
SIL1-202ENST00000394817 KCNN1Q92952 543 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms