RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 EXTL3O43909 919 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 N4BP1O75113 896 aaKnown RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 NDUFA10O95299 355 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 HOXD8P13378 290 aaPredicted RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 UCHL3P15374 230 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 FLT3LGP49771 235 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 CPT1AP50416 773 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 BEX3Q00994 111 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 ARID5AQ03989 594 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 PPP3CAQ08209 521 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 ENOX2Q16206 610 aaKnown RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 MAPK6Q16659 721 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 MTHFD1LQ6UB35 978 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 ZBTB33Q86T24 672 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 USP37Q86T82 979 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 PLEKHO2Q8TD55 490 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 CCDC42Q96M95 316 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 SCLT1Q96NL6 688 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 POP1Q99575 1024 aaKnown RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 MRPL4Q9BYD3 311 aaKnown RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 INO80BQ9C086 356 aaPredicted RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 INTS2Q9H0H0 1204 aaKnown RBP9.4□□□□□ -0.91
TDP1-203ENST00000393454 DEF6Q9H4E7 631 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 KIAA1586Q9HCI6 787 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 CREBZFQ9NS37 354 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 FHOD1Q9Y613 1164 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 SIP14410 1827 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 CLDN3O15551 220 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 IPO7O95373 1038 aaKnown RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 PIGRP01833 764 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 EDN1P05305 212 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 PLEKP08567 350 aaPredicted RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 ACOT2P49753 483 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 APLP1P51693 650 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 CDK17Q00537 523 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 PRKCZQ05513 592 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 CYP24A1Q07973 514 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 ASIC2Q16515 512 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 KIAA0753Q2KHM9 967 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 TDRD12Q587J7 1177 aaKnown RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 CDCA2Q69YH5 1023 aaPredicted RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 GJB7Q6PEY0 223 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 TRIM65Q6PJ69 517 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
TDP1-203ENST00000393454 CCDC170Q8IYT3 715 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 PPP1R13LQ8WUF5 828 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 KCNN1Q92952 543 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 FBXL18Q96ME1 805 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 MAP7D2Q96T17 732 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 SIX2Q9NPC8 291 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 LZTFL1Q9NQ48 299 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 SETD4Q9NVD3 440 aa9.39□□□□□ -0.91
TDP1-203ENST00000393454 RRN3P2A6NIE6 340 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 LRRIQ3A6PVS8 624 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 KIAA0391O15091 583 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 AKR1B10O60218 316 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 MSCO60682 206 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 TRPA1O75762 1119 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 LDHAP00338 332 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 VTNP04004 478 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 AKR1A1P14550 325 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 HNRNPH3P31942 346 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 PHKA2P46019 1235 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 MXI1P50539 228 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 NLRP11P59045 1033 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 PTENP60484 403 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SP3Q02447 781 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 MAP2K1Q02750 393 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 HSP90AA2PQ14568 343 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 SLC9C1Q4G0N8 1177 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 C1orf220Q5T0J3 134 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 DPY19L2P1Q6NXN4 242 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 PARD3BQ8TEW8 1205 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SYN2Q92777 582 aaPredicted RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 HAPLN2Q9GZV7 340 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 CCDC113Q9H0I3 377 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.912e-9■■■■■ 223.6
TDP1-203ENST00000393454 ARHGAP20Q9P2F6 1191 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 STYXL1Q9Y6J8 313 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 A0A087WZ62 844 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 A0A0B4J269 797 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 P4HA2O15460 535 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SERPING1P05155 500 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SMIM10L2AP0DMW4 78 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SMIM10L2BP0DMW5 78 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 PSEN2P49810 448 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 KRT83P78385 493 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 PRPF4BQ13523 1007 aaKnown RBP9.38□□□□□ -0.91
TDP1-203ENST00000393454 MFSD10Q14728 455 aa9.38□□□□□ -0.91
TDP1-203ENST00000393454 SPA17Q15506 151 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms