RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 TRIM59Q8IWR1 403 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
CLTC-202ENST00000393043 SMYD2Q9NRG4 433 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
CLTC-202ENST00000393043 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 PSMD14O00487 310 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 S100BP04271 92 aaPredicted RBP13.46□□□□□ -0.25
CLTC-202ENST00000393043 NTRK3Q16288 839 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 TWF2Q6IBS0 349 aaKnown RBP13.46□□□□□ -0.25
CLTC-202ENST00000393043 KIAA1841Q6NSI8 718 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 HDAC11Q96DB2 347 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 PACSIN2Q9UNF0 486 aaPredicted RBP13.46□□□□□ -0.25
CLTC-202ENST00000393043 SALL1Q9NSC2 1324 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 TTI1O43156 1089 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 MMEP08473 750 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 MYBP10242 640 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 MMEL1Q495T6 779 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 IRX2Q9BZI1 471 aaPredicted RBP13.46□□□□□ -0.25
CLTC-202ENST00000393043 EHD4Q9H223 541 aa13.46□□□□□ -0.25
CLTC-202ENST00000393043 DNAJC17Q9NVM6 304 aaKnown RBP13.46□□□□□ -0.25
CLTC-202ENST00000393043 KRT38O76015 456 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 COG7P83436 770 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 CDC42EP1Q00587 391 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 NUGGCQ68CJ6 796 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 TTC1Q99614 292 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 ANKEF1Q9NU02 776 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 BAG2O95816 211 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 PRKCBP05771 671 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 PDCLQ13371 301 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 SYT2Q8N9I0 419 aaPredicted RBP13.46□□□□□ -0.26
CLTC-202ENST00000393043 SEPT1Q8WYJ6 367 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 SNF8Q96H20 258 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 ZDHHC15Q96MV8 337 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 NUDCD1Q96RS6 583 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.26
CLTC-202ENST00000393043 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 GYS1P13807 737 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 MUTP22033 750 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 RFC5P40937 340 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 STX1BP61266 288 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 RNF149Q8NC42 400 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 ESYT3A0FGR9 886 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 GALCP54803 685 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 SNRNP35Q16560 246 aaKnown RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 SYDE1Q6ZW31 735 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 GSPT2Q8IYD1 628 aaKnown RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 SCYL3Q8IZE3 742 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.45□□□□□ -0.263e-8■■■■■ 70.6
CLTC-202ENST00000393043 BCL9O00512 1426 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 IQCA1LA6NCM1 817 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 RASA4BC9J798 803 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 MAPK13O15264 365 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 RASA4O43374 803 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 MAP2K2P36507 400 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 PPP2R2AP63151 447 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 SLC16A10Q8TF71 515 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 MOV10L1Q9BXT6 1211 aaKnown RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 FAM217BQ9NTX9 383 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 TNS2Q63HR2 1409 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 COL5A2P05997 1499 aaPredicted RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 TXNP10599 105 aaKnown RBP13.45□□□□□ -0.26
CLTC-202ENST00000393043 VSNL1P62760 191 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 CATSPER3Q86XQ3 398 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 ZNF560Q96MR9 790 aa13.45□□□□□ -0.26
CLTC-202ENST00000393043 KRT3P12035 628 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 RCN2Q14257 317 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 ATP6V1G3Q96LB4 118 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 PITPNM3Q9BZ71 974 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 POLLQ9UGP5 575 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 TOM1L1O75674 476 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 FUCA2Q9BTY2 467 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 KRT10P13645 584 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 MAGOHP61326 146 aaKnown RBP13.44□□□□□ -0.26
CLTC-202ENST00000393043 EPC1Q9H2F5 836 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 SMARCAD1Q9H4L7 1026 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 MYOZ2Q9NPC6 264 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 MAP3K20Q9NYL2 800 aaKnown RBP13.44□□□□□ -0.26
CLTC-202ENST00000393043 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 COPEO14579 308 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 DCTN3O75935 186 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 KRT14P02533 472 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 STILQ15468 1287 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 NYAP1Q6ZVC0 841 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 SAMD3Q8N6K7 520 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 CHST13Q8NET6 341 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
CLTC-202ENST00000393043 IL1R1P14778 569 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms