RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ATP6V1G1O75348 118 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ATP6V1C1P21283 382 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MED21Q13503 144 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MMEL1Q495T6 779 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TTBK2Q6IQ55 1244 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 KRT35Q92764 455 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 FNBP1Q96RU3 617 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PSTPIP2Q9H939 334 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 METTL14Q9HCE5 456 aaKnown RBP18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 LRCH1Q9Y2L9 728 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 AFF2P51816 1311 aa18.12■□□□□ 0.49
TRAF3IP1-202ENST00000391993 GOLGA8IPA6NC78 632 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 GOLGA8JA6NMD2 632 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CCDC22O60826 627 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PGM3O95394 542 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TLDC1Q6P9B6 456 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ELMO3Q96BJ8 720 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SUCLA2Q9P2R7 463 aaPredicted RBP18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MT-ND3P03897 115 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 HARSP12081 509 aaKnown RBP18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MX2P20592 715 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CCNFP41002 786 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 GCLMP48507 274 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MARCKSL1P49006 195 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SNAP25P60880 206 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 IZUMO3Q5VZ72 239 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MPP4Q96JB8 637 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 EDEM3Q9BZQ6 932 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 JCADQ9P266 1359 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L15C9J2P7 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L13C9JLJ4 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L11C9JVI0 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L18D6R9N7 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L22D6RA61 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L17D6RBQ6 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L19D6RCP7 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L20D6RJB6 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ALDH18A1P54886 795 aaKnown RBP18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SP4Q02446 784 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L24Q0WX57 530 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TRIP10Q15642 601 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MAP7D1Q3KQU3 841 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 BSPRYQ5W0U4 402 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 USP17L6PQ6QN14 398 aa18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 RBM15Q96T37 977 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ADGRA1Q86SQ6 560 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CCDC97Q96F63 343 aaPredicted RBP18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CLMNQ96JQ2 1002 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TMEM47Q9BQJ4 181 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 NAALADL1Q9UQQ1 740 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SIGLEC1Q9BZZ2 1709 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PI4K2BG5E9Z4 385 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CASP7P55210 303 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 RIPK1Q13546 671 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SEC23AQ15436 765 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PRUNE1Q86TP1 453 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CLEC10AQ8IUN9 316 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PROM2Q8N271 834 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CCDC89Q8N998 374 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 CFAP57Q96MR6 1250 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ANAPC4Q9UJX5 808 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PAIP2BQ9ULR5 123 aaKnown RBP18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MAP3K15Q6ZN16 1313 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ZNF189O75820 626 aaPredicted RBP18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MMP13P45452 471 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TMPRSS15P98073 1019 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 EPC2Q52LR7 807 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ODR4Q5SWX8 454 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 LRRC74BQ6ZQY2 392 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 NUP85Q9BW27 656 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TACC3Q9Y6A5 838 aa18.1■□□□□ 0.49
TRAF3IP1-202ENST00000391993 FESP07332 822 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 NCF2P19878 526 aaPredicted RBP18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 POLGP54098 1239 aaPredicted RBP18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MECOMQ03112 1051 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 KCTD1Q719H9 257 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SCFD2Q8WU76 684 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TEKT1Q969V4 418 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PGM2Q96G03 612 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TUBP50607 506 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 GRB10Q13322 594 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 KCNK18Q7Z418 384 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 ECHDC2Q86YB7 292 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TRIML2Q8N7C3 387 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 KLHL23Q8NBE8 558 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 GRAMD1AQ96CP6 724 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 MTBPQ96DY7 904 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 SLC13A1Q9BZW2 595 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PYGBP11216 843 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 RARGP13631 454 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 PSMC2P35998 433 aaKnown RBP18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 AP2B1P63010 937 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 NT5DC3Q86UY8 548 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 TTC16Q8NEE8 873 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 GRK7Q8WTQ7 553 aa18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 L3MBTL3Q96JM7 780 aaPredicted RBP18.09■□□□□ 0.49
TRAF3IP1-202ENST00000391993 LOC100653049A0A140TA62 436 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms