RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 PAK2Q13177 524 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 C10orf67Q8IYJ2 551 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 C11orf70Q9BRQ4 267 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 MAK16Q9BXY0 300 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 STK33Q9BYT3 514 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 EPB41L5Q9HCM4 733 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 SSU72P8A0A1W2PR75 194 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 RNF225M0QZC1 329 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 EPHB6O15197 1021 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 STAM2O75886 525 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 HEXIM1O94992 359 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 SF3A3Q12874 501 aaKnown RBP eCLIP13.79□□□□□ -0.26e-8■■■■■ 39.6
ERCC2-204ENST00000391945 ZNF211Q13398 564 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 TAB3Q8N5C8 712 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 PRPF31Q8WWY3 499 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 BCAS3Q9H6U6 928 aa13.79□□□□□ -0.2
ERCC2-204ENST00000391945 CNOT8Q9UFF9 292 aaKnown RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 MORC2Q9Y6X9 1032 aaPredicted RBP13.79□□□□□ -0.2
ERCC2-204ENST00000391945 KLRC1P26715 233 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 CA8P35219 290 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 TTC19Q6DKK2 380 aaPredicted RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 SLC30A5Q8TAD4 765 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 PTPN22Q9Y2R2 807 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 TLR3O15455 904 aaKnown RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 PPFIA1Q13136 1202 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 UGCGQ16739 394 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 KCTD16Q68DU8 428 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 NOA1Q8NC60 698 aaKnown RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 MAGOHBQ96A72 148 aaKnown RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 IGLV3-22A0A075B6J6 115 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 A0A1W2PQJ5 194 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
ERCC2-204ENST00000391945 GH1P01241 217 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 MUTP22033 750 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 HSD17B4P51659 736 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 GALCP54803 685 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 ZSCAN26Q16670 478 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 SAMD3Q8N6K7 520 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 HESX1Q9UBX0 185 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 TRAF3IP3Q9Y228 551 aa13.78□□□□□ -0.2
ERCC2-204ENST00000391945 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 PLA2G6O60733 806 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 GTF2A2P52657 109 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.77□□□□□ -0.2
ERCC2-204ENST00000391945 NIPA1Q7RTP0 329 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 DNERQ8NFT8 737 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 UHMK1Q8TAS1 419 aaKnown RBP13.77□□□□□ -0.2
ERCC2-204ENST00000391945 MRRFQ96E11 262 aaKnown RBP13.77□□□□□ -0.2
ERCC2-204ENST00000391945 ERAP1Q9NZ08 941 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 ANAPC7Q9UJX3 599 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 NRAPQ86VF7 1730 aa13.77□□□□□ -0.2
ERCC2-204ENST00000391945 FOXN3O00409 490 aaPredicted RBP13.77□□□□□ -0.21
ERCC2-204ENST00000391945 EFNA5P52803 228 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 COPS5Q92905 334 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 SLC35C1Q96A29 364 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 C2orf40Q9H1Z8 148 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 ATP1A2P50993 1020 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 GPC3P51654 580 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 SNX1Q13596 522 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 GJC2Q5T442 439 aaPredicted RBP13.77□□□□□ -0.21
ERCC2-204ENST00000391945 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.77□□□□□ -0.21
ERCC2-204ENST00000391945 PPP1R13LQ8WUF5 828 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 MROH8Q9H579 483 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 FAM204AQ9H8W3 233 aa13.77□□□□□ -0.21
ERCC2-204ENST00000391945 FGGP02679 453 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 MS4A14Q96JA4 679 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 HEXIM2Q96MH2 286 aaKnown RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 IVLP07476 585 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 POLR2BP30876 1174 aaKnown RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 MXD4Q14582 209 aaPredicted RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 DUOXA2Q1HG44 320 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 MIIPQ5JXC2 388 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 LRRC15Q8TF66 581 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 AFG1LQ8WV93 481 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 PACSIN1Q9BY11 444 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
ERCC2-204ENST00000391945 SYNJ2BP-COX16A0A087WUM0 186 aa13.76□□□□□ -0.21
ERCC2-204ENST00000391945 ANO9A1A5B4 782 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms