RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SNAPC2Q13487 334 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 HP1BP3Q5SSJ5 553 aaPredicted RBP20.2■□□□□ 0.82
CSPG5-202ENST00000383738 SEC16BQ96JE7 1060 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 MED10Q9BTT4 135 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 RUSC1Q9BVN2 902 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 RAD51CO43502 376 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 ICAM1P05362 532 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 GLI1P08151 1106 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 NSFP46459 744 aaKnown RBP20.2■□□□□ 0.82
CSPG5-202ENST00000383738 PTGISQ16647 500 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 NSMCE1Q8WV22 266 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 ZNF653Q96CK0 615 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 NAP1L3Q99457 506 aaPredicted RBP20.2■□□□□ 0.82
CSPG5-202ENST00000383738 TRIM51Q9BSJ1 452 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 NUCKS1Q9H1E3 243 aaKnown RBP20.2■□□□□ 0.82
CSPG5-202ENST00000383738 CPA4Q9UI42 421 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 ZNF568Q3ZCX4 644 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 UNC45AQ9H3U1 944 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
CSPG5-202ENST00000383738 SART1O43290 800 aaKnown RBP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 ARPP19P56211 112 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 TMEM139Q8IV31 216 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 CLMNQ96JQ2 1002 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 NOP53Q9NZM5 478 aaKnown RBP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 CHORDC1Q9UHD1 332 aaPredicted RBP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 FANCGO15287 622 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 UBL4BQ8N7F7 174 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 MCPH1Q8NEM0 835 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 OPTNQ96CV9 577 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 VPS37BQ9H9H4 285 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 APBB1IPQ7Z5R6 666 aaPredicted RBP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 ZBTB10Q96DT7 871 aa20.19■□□□□ 0.82
CSPG5-202ENST00000383738 P2RX7Q99572 595 aaKnown RBP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 GPBP1L1Q9HC44 474 aaPredicted RBP20.19■□□□□ 0.82
CSPG5-202ENST00000383738 TTI1O43156 1089 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 PMS1P54277 932 aaKnown RBP20.18■□□□□ 0.82
CSPG5-202ENST00000383738 CCDC125Q86Z20 511 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 FBXO16Q8IX29 292 aaPredicted RBP20.18■□□□□ 0.82
CSPG5-202ENST00000383738 NEK9Q8TD19 979 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 RPS6KC1Q96S38 1066 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 TAF1DQ9H5J8 278 aaPredicted RBP20.18■□□□□ 0.82
CSPG5-202ENST00000383738 EMSYQ7Z589 1322 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 SLIT2O94813 1529 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 RASGRF2O14827 1237 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 ADCY8P40145 1251 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 PRKCEQ02156 737 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 FAM83AQ86UY5 434 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 MTRQ99707 1265 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 RPA1P27694 616 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 MFAP3P55082 362 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 GBP5Q96PP8 586 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 SMC6Q96SB8 1091 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 PLCB1Q9NQ66 1216 aa20.18■□□□□ 0.82
CSPG5-202ENST00000383738 IRF6O14896 467 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 SLC9A1P19634 815 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 YY1AP1Q9H869 796 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 H0YCG3 227 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 TWF2Q6IBS0 349 aaKnown RBP20.17■□□□□ 0.82
CSPG5-202ENST00000383738 TRIM50Q86XT4 487 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 ARMC2Q8NEN0 867 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 KCNG1Q9UIX4 513 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 CASP4P49662 377 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 LONP2Q86WA8 852 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-202ENST00000383738 KAT2BQ92831 832 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 CHMP6Q96FZ7 201 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 GMCL1Q96IK5 515 aa20.17■□□□□ 0.82
CSPG5-202ENST00000383738 TYW1Q9NV66 732 aaKnown RBP20.17■□□□□ 0.82
CSPG5-202ENST00000383738 CYP11B2P19099 503 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 KLRC1P26715 233 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 SYCE1Q8N0S2 351 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 TRIM4Q9C037 500 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 GPRC5DQ9NZD1 345 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 GLIS3Q8NEA6 775 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 NACA2Q9H009 215 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 KIF9Q9HAQ2 790 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 ETNK1Q9HBU6 452 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 IRAK4Q9NWZ3 460 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 SH3BP5LQ7L8J4 393 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
CSPG5-202ENST00000383738 DBR1Q9UK59 544 aaKnown RBP20.16■□□□□ 0.82
CSPG5-202ENST00000383738 hCG_2014768A0A024R1R8 64 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 RHOBTB3O94955 611 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 MSH2P43246 934 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 DR1Q01658 176 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 VGLL4Q14135 290 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 EPC2Q52LR7 807 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 GJB7Q6PEY0 223 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 TMEM270Q6UE05 265 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 GLYCTKQ8IVS8 523 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 TSC22D3Q99576 134 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 VCXQ9H320 206 aa20.16■□□□□ 0.82
CSPG5-202ENST00000383738 ADAMTS3O15072 1205 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 FAM107AO95990 144 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 FGFR4P22455 802 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 SFNP31947 248 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms