RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GPD1LQ8N335 351 aa25.02■■□□□ 1.6
VPS16-201ENST00000380443 MYH9P35579 1960 aaKnown RBP25.01■■□□□ 1.59
VPS16-201ENST00000380443 OTOFQ9HC10 1997 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 LOC102724159A0A0B4J2E5 919 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 GPC3P51654 580 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 MFAP3P55082 362 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 PPIL2Q13356 520 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 EMC2Q15006 297 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 PWP2Q15269 919 aaKnown RBP25.01■■□□□ 1.59
VPS16-201ENST00000380443 ARHGAP44Q17R89 818 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 TRMT1LQ7Z2T5 733 aaKnown RBP25.01■■□□□ 1.59
VPS16-201ENST00000380443 OLIG1Q8TAK6 271 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 PLEKHO2Q8TD55 490 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 POMGNT1Q8WZA1 660 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 AGPAT1Q99943 283 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 SELENOOQ9BVL4 669 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 DHX33Q9H6R0 707 aaKnown RBP25.01■■□□□ 1.59
VPS16-201ENST00000380443 VIPAS39Q9H9C1 493 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 AGTPBP1Q9UPW5 1226 aa25.01■■□□□ 1.59
VPS16-201ENST00000380443 FOXN3O00409 490 aaPredicted RBP25■■□□□ 1.59
VPS16-201ENST00000380443 NAMPTP43490 491 aa25■■□□□ 1.59
VPS16-201ENST00000380443 GALCP54803 685 aa25■■□□□ 1.59
VPS16-201ENST00000380443 C2orf54Q08AI8 447 aa25■■□□□ 1.59
VPS16-201ENST00000380443 TCEAL1Q15170 157 aa25■■□□□ 1.59
VPS16-201ENST00000380443 NCAPG2Q86XI2 1143 aa25■■□□□ 1.59
VPS16-201ENST00000380443 CBWD2Q8IUF1 395 aa25■■□□□ 1.59
VPS16-201ENST00000380443 AFAP1L1Q8TED9 768 aa25■■□□□ 1.59
VPS16-201ENST00000380443 CTNNBL1Q8WYA6 563 aaPredicted RBP25■■□□□ 1.59
VPS16-201ENST00000380443 RFFLQ8WZ73 363 aa25■■□□□ 1.59
VPS16-201ENST00000380443 PORCNQ9H237 461 aa25■■□□□ 1.59
VPS16-201ENST00000380443 ELP3Q9H9T3 547 aa25■■□□□ 1.59
VPS16-201ENST00000380443 SUCLA2Q9P2R7 463 aaPredicted RBP25■■□□□ 1.59
VPS16-201ENST00000380443 ZC3H11AO75152 810 aaKnown RBP eCLIP25■■□□□ 1.59
VPS16-201ENST00000380443 KIF4AO95239 1232 aa25■■□□□ 1.59
VPS16-201ENST00000380443 FTCDO95954 541 aa25■■□□□ 1.59
VPS16-201ENST00000380443 PIGRP01833 764 aa25■■□□□ 1.59
VPS16-201ENST00000380443 SP4Q02446 784 aa25■■□□□ 1.59
VPS16-201ENST00000380443 CYP24A1Q07973 514 aa25■■□□□ 1.59
VPS16-201ENST00000380443 MTERF2Q49AM1 385 aa25■■□□□ 1.59
VPS16-201ENST00000380443 CCNI2Q6ZMN8 369 aaPredicted RBP25■■□□□ 1.59
VPS16-201ENST00000380443 SEPT14Q6ZU15 432 aa25■■□□□ 1.59
VPS16-201ENST00000380443 FASTKD5Q7L8L6 764 aaKnown RBP25■■□□□ 1.59
VPS16-201ENST00000380443 GLYCTKQ8IVS8 523 aa25■■□□□ 1.59
VPS16-201ENST00000380443 ASCC2Q9H1I8 757 aaPredicted RBP25■■□□□ 1.59
VPS16-201ENST00000380443 STYXL1Q9Y6J8 313 aa25■■□□□ 1.59
VPS16-201ENST00000380443 ANKRD62A6NC57 917 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 SOWAHBA6NEL2 793 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 HNRNPDLO14979 420 aaKnown RBP24.99■■□□□ 1.59
VPS16-201ENST00000380443 CXCR5P32302 372 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 STRN3Q13033 797 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 SMC1AQ14683 1233 aaKnown RBP24.99■■□□□ 1.59
VPS16-201ENST00000380443 SLFN12LQ6IEE8 588 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 SLC39A4Q6P5W5 647 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 ENOSF1Q7L5Y1 443 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 EXOC8Q8IYI6 725 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 SLC7A3Q8WY07 619 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 FAM167AQ96KS9 214 aa24.99■■□□□ 1.59
VPS16-201ENST00000380443 GOLGA8IPA6NC78 632 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 ZNF233A6NK53 670 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 GOLGA8JA6NMD2 632 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 ATP4AP20648 1035 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 UBA1P22314 1058 aaKnown RBP24.98■■□□□ 1.59
VPS16-201ENST00000380443 TNFRSF8P28908 595 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 ARL2P36404 184 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 HADHBP55084 474 aaKnown RBP24.98■■□□□ 1.59
VPS16-201ENST00000380443 FBXL13Q8NEE6 735 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 KIFC3Q9BVG8 833 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 DIS3Q9Y2L1 958 aaKnown RBP24.98■■□□□ 1.59
VPS16-201ENST00000380443 LRRIQ3A6PVS8 624 aaPredicted RBP24.98■■□□□ 1.59
VPS16-201ENST00000380443 EXTL3O43909 919 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 FARP2O94887 1054 aaPredicted RBP24.98■■□□□ 1.59
VPS16-201ENST00000380443 OSBPP22059 807 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 ARHGEF19Q8IW93 802 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 RHOT2Q8IXI1 618 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 FAM71AQ8IYT1 594 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 CNKSR2Q8WXI2 1034 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 SEPT1Q8WYJ6 367 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 SAAL1Q96ER3 474 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 CDCA5Q96FF9 252 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 BICD1Q96G01 975 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 OTUD5Q96G74 571 aa24.98■■□□□ 1.59
VPS16-201ENST00000380443 TMEM88BA6NKF7 163 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 CASP8Q14790 479 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 METTL7BQ6UX53 244 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 ACTRT1Q8TDG2 376 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 NT5C1BQ96P26 610 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 TMEM134Q9H6X4 195 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 STXBP5LQ9Y2K9 1186 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 ADGRA3Q8IWK6 1321 aa24.97■■□□□ 1.59
VPS16-201ENST00000380443 DOCK5Q9H7D0 1870 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 GSTTP1A0A1W2PQM5 241 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 CNMDO75829 334 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 LDHAP00338 332 aaKnown RBP24.96■■□□□ 1.59
VPS16-201ENST00000380443 GZMAP12544 262 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 LIG4P49917 911 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 CLDN10P78369 228 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 PEX26Q7Z412 305 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 ZSWIM2Q8NEG5 633 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 PSMB7Q99436 277 aa24.96■■□□□ 1.59
VPS16-201ENST00000380443 ISCUQ9H1K1 167 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms