RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BFSP1Q12934 665 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 ZBTB33Q86T24 672 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 METTL13Q8N6R0 699 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 NOX5Q96PH1 765 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 ACCSQ96QU6 501 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 POLR3FQ9H1D9 316 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 ASCC2Q9H1I8 757 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 ARFGAP3Q9NP61 516 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 PLCB1Q9NQ66 1216 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 LAMA2P24043 3122 aaKnown RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 STAT1P42224 750 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 DRP2Q13474 957 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 AP1ARQ63HQ0 302 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 MYLK4Q86YV6 388 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 GANQ9H2C0 597 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 MYO1AQ9UBC5 1043 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 ESYT3A0FGR9 886 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 FOXN3O00409 490 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 GGPS1O95749 300 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 KCNA2P16389 499 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 TNNI1P19237 187 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 VAMP7P51809 220 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 BIRC3Q13489 604 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 CDCA5Q96FF9 252 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 INTS2Q9H0H0 1204 aaKnown RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 KIAA1522Q9P206 1035 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 ODF2LQ9ULJ1 636 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 PSAPP07602 524 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 KRT5P13647 590 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 EPHX2P34913 555 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 MAP2K2P36507 400 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 PHLDB3Q6NSJ2 640 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 OTUD6AQ7L8S5 288 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 KLHL7Q8IXQ5 586 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 XXYLT1Q8NBI6 393 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 HDAC7Q8WUI4 952 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 SLC20A1Q8WUM9 679 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 DHX38Q92620 1227 aaKnown RBP11.68□□□□□ -0.54
NEDD9-201ENST00000379433 TRIM11Q96F44 468 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 OSGEPQ9NPF4 335 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 TAS2R14Q9NYV8 317 aa11.68□□□□□ -0.54
NEDD9-201ENST00000379433 ADGRA3Q8IWK6 1321 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 RPTORQ8N122 1335 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 MKI67P46013 3256 aaKnown RBP11.67□□□□□ -0.54
NEDD9-201ENST00000379433 KCNK3O14649 394 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ADRB2P07550 413 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 JAK3P52333 1124 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 FIGNQ5HY92 759 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ARHGEF19Q8IW93 802 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 TRIM58Q8NG06 486 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 THOC1Q96FV9 657 aaKnown RBP11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ABCB6Q9NP58 842 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 NEFHP12036 1026 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 FECHP22830 423 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 LIG4P49917 911 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 SNRNP35Q16560 246 aaKnown RBP11.67□□□□□ -0.54
NEDD9-201ENST00000379433 SLC18A3Q16572 532 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ARMC3Q5W041 872 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
NEDD9-201ENST00000379433 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 REPS2Q8NFH8 660 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ANKZF1Q9H8Y5 726 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ZNF302Q9NR11 478 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 PDGFCQ9NRA1 345 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 DOCK5Q9H7D0 1870 aa11.67□□□□□ -0.54
NEDD9-201ENST00000379433 SASH3O75995 380 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 BCRP11274 1271 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 MXI1P50539 228 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 IFT74Q96LB3 600 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 INPP4AQ96PE3 977 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-201ENST00000379433 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 ADSSP30520 456 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 HSDL1Q3SXM5 330 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 IRF2BP2Q7Z5L9 587 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 DAAM2Q86T65 1068 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 IFT81Q8WYA0 676 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 NLRP4Q96MN2 994 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 AP1M1Q9BXS5 423 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 SEZ6LQ9BYH1 1024 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 ZNF646O15015 1829 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-201ENST00000379433 EIF3DO15371 548 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEDD9-201ENST00000379433 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 UBA1P22314 1058 aaKnown RBP11.66□□□□□ -0.54
NEDD9-201ENST00000379433 CETN1Q12798 172 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 ZBTB41Q5SVQ8 909 aa11.66□□□□□ -0.54
NEDD9-201ENST00000379433 SPOPLQ6IQ16 392 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms