RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 H2AFXP16104 143 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 RFX1P22670 979 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 ESRRGP62508 458 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 AGBL3Q8NEM8 1001 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 REEP2Q9BRK0 252 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 HEMGNQ9BXL5 484 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 CPSF3Q9UKF6 684 aaKnown RBP16.02■□□□□ 0.16
NPHP4-201ENST00000378156 SYNGAP1Q96PV0 1343 aa16.02■□□□□ 0.16
NPHP4-201ENST00000378156 NBPF9Q3BBW0 867 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 TADA2BQ86TJ2 420 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 GPD1LQ8N335 351 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 N4BP2L2Q92802 583 aaPredicted RBP16.02■□□□□ 0.15
NPHP4-201ENST00000378156 ZWILCHQ9H900 591 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 HUS1O60921 280 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 COL23A1Q86Y22 540 aaPredicted RBP16.02■□□□□ 0.15
NPHP4-201ENST00000378156 PNKPQ96T60 521 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 TIPINQ9BVW5 301 aa16.02■□□□□ 0.15
NPHP4-201ENST00000378156 SPECC1L-ADORA2AF8WAN1 911 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 PODXLO00592 558 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 EFNA5P52803 228 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 ANKRD20A4Q4UJ75 823 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 ANKRD20A8PQ5CZ79 823 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 ANKRD20A2Q5SQ80 823 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 ANKRD20A1Q5TYW2 823 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 HIBCHQ6NVY1 386 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-201ENST00000378156 ENOSF1Q7L5Y1 443 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 BEST2Q8NFU1 509 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 FAM205AQ6ZU69 1335 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 ZBED1O96006 694 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 CALB1P05937 261 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 KRT3P12035 628 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 UCHL3P15374 230 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 RPS12P25398 132 aaKnown RBP16.01■□□□□ 0.15
NPHP4-201ENST00000378156 MSH2P43246 934 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 PDIK1LQ8N165 341 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 LRRN4CLQ8ND94 238 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 DRC3Q9H069 523 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 RBM12Q9NTZ6 932 aaKnown RBP16.01■□□□□ 0.15
NPHP4-201ENST00000378156 TJP3O95049 919 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 SLC9A1P19634 815 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 SOX5P35711 763 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 BBS9Q3SYG4 887 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 LRRC23Q53EV4 343 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-201ENST00000378156 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
NPHP4-201ENST00000378156 SLC37A4O43826 429 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 TKFCQ3LXA3 575 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 ARL13BQ3SXY8 428 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 PDCD7Q8N8D1 485 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 RNF149Q8NC42 400 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 SDCCAG3Q96C92 435 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 STRIP2Q9ULQ0 834 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 SCAF8Q9UPN6 1271 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 ZBTB24O43167 697 aaPredicted RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 GGPS1O95749 300 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 ECE1P42892 770 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 ADCY2Q08462 1091 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 DUOXA2Q1HG44 320 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 CDKAL1Q5VV42 579 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 RFFLQ8WZ73 363 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 DUSP10Q9Y6W6 482 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 E2F4Q16254 413 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 PPP6R3Q5H9R7 873 aaPredicted RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 SAMD7Q7Z3H4 446 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 ELAC2Q9BQ52 826 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 FBXL5Q9UKA1 691 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 EXOC1LA0A1B0GW35 172 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 MMEP08473 750 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 MYBP10242 640 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 ANXA13P27216 316 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 EP400NLQ6ZTU2 488 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 CALR3Q96L12 384 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
NPHP4-201ENST00000378156 FHOD1Q9Y613 1164 aa16■□□□□ 0.15
NPHP4-201ENST00000378156 SLC26A4O43511 780 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 NFIAQ12857 509 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 BZW1Q7L1Q6 419 aaKnown RBP15.99■□□□□ 0.15
NPHP4-201ENST00000378156 INPP5FQ9Y2H2 1132 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 GSTA1P08263 222 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 GSTA2P09210 222 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
NPHP4-201ENST00000378156 C4orf50Q6ZRC1 276 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 ZNF564Q8TBZ8 553 aaPredicted RBP15.99■□□□□ 0.15
NPHP4-201ENST00000378156 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 HSPH1Q92598 858 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 UBE4BO95155 1302 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 GNA15P30679 374 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 TFDP2Q14188 446 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 NUGGCQ68CJ6 796 aa15.99■□□□□ 0.15
NPHP4-201ENST00000378156 NXNQ6DKJ4 435 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms