RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PPM1KQ8N3J5 372 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 BICD1Q96G01 975 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 ADGRA3Q8IWK6 1321 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 LOC285556D6RIA3 1793 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 SUPT20HL2P0C7V6 817 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 MTERF2Q49AM1 385 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 GADL1Q6ZQY3 521 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 MOB2Q70IA6 237 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 CYFIP1Q7L576 1253 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 USP37Q86T82 979 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 PALB2Q86YC2 1186 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 DNERQ8NFT8 737 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 PARD3BQ8TEW8 1205 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 SLC20A1Q8WUM9 679 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 CLMNQ96JQ2 1002 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 XPNPEP1Q9NQW7 623 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 TAS2R14Q9NYV8 317 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 SUCLA2Q9P2R7 463 aaPredicted RBP21.87■■□□□ 1.09
VSX1-202ENST00000376709 PHACTR2O75167 634 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 HEXIM1O94992 359 aaKnown RBP21.86■■□□□ 1.09
VSX1-202ENST00000376709 EPHB4P54760 987 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 RTP1P59025 263 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 SP2Q02086 613 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 CNTN2Q02246 1040 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 XKR3Q5GH77 459 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 SLC39A4Q6P5W5 647 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 SND1Q7KZF4 910 aaKnown RBP eCLIP21.86■■□□□ 1.09
VSX1-202ENST00000376709 NT5DC3Q86UY8 548 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 IFT20Q8IY31 132 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 OTUD5Q96G74 571 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 POP1Q99575 1024 aaKnown RBP21.86■■□□□ 1.09
VSX1-202ENST00000376709 THAP2Q9H0W7 228 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 POLR3FQ9H1D9 316 aaPredicted RBP21.86■■□□□ 1.09
VSX1-202ENST00000376709 PDLIM7Q9NR12 457 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 BTBD7Q9P203 1132 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 ADAM21Q9UKJ8 722 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 FAN1Q9Y2M0 1017 aa21.86■■□□□ 1.09
VSX1-202ENST00000376709 ANKRD62A6NC57 917 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 TNFRSF8P28908 595 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 IREB2P48200 963 aaKnown RBP21.85■■□□□ 1.09
VSX1-202ENST00000376709 AARSP49588 968 aaKnown RBP eCLIP21.85■■□□□ 1.09
VSX1-202ENST00000376709 METTL13Q8N6R0 699 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 ACTRT1Q8TDG2 376 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 KAT5Q92993 513 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 AMFRQ9UKV5 643 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 PGRMC1O00264 195 aaKnown RBP21.85■■□□□ 1.09
VSX1-202ENST00000376709 IRF6O14896 467 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 BUB1BO60566 1050 aaPredicted RBP21.85■■□□□ 1.09
VSX1-202ENST00000376709 GLI1P08151 1106 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 POLGP54098 1239 aaPredicted RBP21.85■■□□□ 1.09
VSX1-202ENST00000376709 BRDTQ58F21 947 aaPredicted RBP21.85■■□□□ 1.09
VSX1-202ENST00000376709 LBX2Q6XYB7 198 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 SEPT14Q6ZU15 432 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 PLEKHA4Q9H4M7 779 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 TMEM8AQ9HCN3 771 aa21.85■■□□□ 1.09
VSX1-202ENST00000376709 H0YCG3 227 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 MFAP3P55082 362 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 GUCY2DQ02846 1103 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 EMBQ6PCB8 327 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 KLHL7Q8IXQ5 586 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 EPB41L5Q9HCM4 733 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 ZNF302Q9NR11 478 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 STXBP5LQ9Y2K9 1186 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 DLATP10515 647 aaKnown RBP21.84■■□□□ 1.09
VSX1-202ENST00000376709 EMC2Q15006 297 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 RPUSD2Q8IZ73 545 aaKnown RBP21.84■■□□□ 1.09
VSX1-202ENST00000376709 GPD1LQ8N335 351 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 TMC2Q8TDI7 906 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 SEMA4DQ92854 862 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 ARHGEF26Q96DR7 871 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 CDCA5Q96FF9 252 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 FBXL18Q96ME1 805 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 TMEM59LQ9UK28 342 aa21.84■■□□□ 1.09
VSX1-202ENST00000376709 MCCD1P59942 119 aaPredicted RBP21.83■■□□□ 1.09
VSX1-202ENST00000376709 CYP24A1Q07973 514 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 FSTL1Q12841 308 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 FBXL13Q8NEE6 735 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 HES6Q96HZ4 224 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 MFSD14AQ96MC6 490 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.83■■□□□ 1.09
VSX1-202ENST00000376709 TOPORSQ9NS56 1045 aaPredicted RBP21.83■■□□□ 1.09
VSX1-202ENST00000376709 FBXO40Q9UH90 709 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 USP20Q9Y2K6 914 aa21.83■■□□□ 1.09
VSX1-202ENST00000376709 NOC2LQ9Y3T9 749 aaKnown RBP21.83■■□□□ 1.09
VSX1-202ENST00000376709 GOLGA6BA6NDN3 693 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ICAM3P32942 547 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ABCD1P33897 745 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 FAM71AQ8IYT1 594 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ZNF526Q8TF50 670 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 KREMEN1Q96MU8 473 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 GDF3Q9NR23 364 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ARHGAP28Q9P2N2 729 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ZC3H4Q9UPT8 1303 aaKnown RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 A0A0G2JLL6 359 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 ESYT3A0FGR9 886 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ZSCAN5CA6NGD5 496 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 SGPL1O95470 568 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 FTLP02792 175 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 GARTP22102 1010 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 ALDH5A1P51649 535 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms