RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ATMINO43313 823 aaPredicted RBP17.73■□□□□ 0.43
TRIM39-201ENST00000376656 CHKAP35790 457 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 ATP11AP98196 1134 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 KIF22Q14807 665 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 SIX1Q15475 284 aaPredicted RBP17.73■□□□□ 0.43
TRIM39-201ENST00000376656 QRICH1Q2TAL8 776 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 TRMT10CQ7L0Y3 403 aaKnown RBP17.73■□□□□ 0.43
TRIM39-201ENST00000376656 PCDHA1Q9Y5I3 950 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
TRIM39-201ENST00000376656 GABPAQ06546 454 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 CYP1B1Q16678 543 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 CYFIP1Q7L576 1253 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 SLC13A5Q86YT5 568 aaPredicted RBP17.73■□□□□ 0.43
TRIM39-201ENST00000376656 SERPINB12Q96P63 405 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 TGS1Q96RS0 853 aaKnown RBP17.73■□□□□ 0.43
TRIM39-201ENST00000376656 RGL1Q9NZL6 768 aa17.73■□□□□ 0.43
TRIM39-201ENST00000376656 ADCY1Q08828 1119 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 CALCOCO2Q13137 446 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 UTP4Q969X6 686 aaKnown RBP17.72■□□□□ 0.43
TRIM39-201ENST00000376656 BTBD6Q96KE9 485 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 CD209Q9NNX6 404 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRIM39-201ENST00000376656 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 GGPS1O95749 300 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 BRAFP15056 766 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 MYL7Q01449 175 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 BLMHQ13867 455 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 TNIP1Q15025 636 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 PIGOQ8TEQ8 1089 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 LENG9Q96B70 501 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 RAD21O60216 631 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 PDE6BP35913 854 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 RINT1Q6NUQ1 792 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 ECHDC2Q86YB7 292 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 CYP4X1Q8N118 509 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 ETNK1Q9HBU6 452 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 NKX1-2Q9UD57 310 aaPredicted RBP17.72■□□□□ 0.43
TRIM39-201ENST00000376656 CORO1CQ9ULV4 474 aaPredicted RBP17.72■□□□□ 0.43
TRIM39-201ENST00000376656 RABGAP1Q9Y3P9 1069 aa17.72■□□□□ 0.43
TRIM39-201ENST00000376656 FAM86B1E9PN63 330 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 MEIS2O14770 477 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 FAM86B2P0C5J1 330 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 CCNB1P14635 433 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 GPC5P78333 572 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
TRIM39-201ENST00000376656 DNAJC18Q9H819 358 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 MTUS1Q9ULD2 1270 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 KIF3CO14782 793 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 ECEL1O95672 775 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 SLURP2P0DP57 97 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 TAF11Q15544 211 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 SLC30A10Q6XR72 485 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 RDH13Q8NBN7 331 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 RPS6KC1Q96S38 1066 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 PLCD4Q9BRC7 762 aa17.71■□□□□ 0.43
TRIM39-201ENST00000376656 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.42
TRIM39-201ENST00000376656 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.42
TRIM39-201ENST00000376656 ENO4A6NNW6 628 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 EML1O00423 815 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 FAM13AO94988 1023 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 UPP2O95045 317 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
TRIM39-201ENST00000376656 STX2P32856 288 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 C11orf91Q3C1V1 193 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 RNF207Q6ZRF8 634 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 RPUSD2Q8IZ73 545 aaKnown RBP17.7■□□□□ 0.42
TRIM39-201ENST00000376656 SLC17A8Q8NDX2 589 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 CD101Q93033 1021 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 SAAL1Q96ER3 474 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 KLHL14Q9P2G3 628 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 TBK1Q9UHD2 729 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 EYA4O95677 639 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 KYNUQ16719 465 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 C1orf54Q8WWF1 131 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 TRIM7Q9C029 511 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 EIF3DO15371 548 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRIM39-201ENST00000376656 UNC5CO95185 931 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 CETPP11597 493 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 CCNG1P51959 295 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 KRT17Q04695 432 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 SNX1Q13596 522 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
TRIM39-201ENST00000376656 MKNK1Q9BUB5 465 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 WNT8AQ9H1J5 351 aa17.7■□□□□ 0.42
TRIM39-201ENST00000376656 UBE2TQ9NPD8 197 aaPredicted RBP17.7■□□□□ 0.42
TRIM39-201ENST00000376656 MPHOSPH10O00566 681 aaKnown RBP17.69■□□□□ 0.42
TRIM39-201ENST00000376656 ZBTB39O15060 712 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 LINGO3P0C6S8 592 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 SNAP25P60880 206 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 ARHGEF19Q8IW93 802 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 LMO3Q8TAP4 145 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms