RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 BTBD6Q96KE9 485 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 RANBP17Q9H2T7 1088 aaKnown RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 NKX1-2Q9UD57 310 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 PYGMP11217 842 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 TM4SF1P30408 202 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 NOVP48745 357 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 WDR66Q8TBY9 1149 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 PWWP2AQ96N64 755 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 NSRP1Q9H0G5 558 aaKnown RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 KCNK9Q9NPC2 374 aa12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
TM9SF2-201ENST00000376387 TP73O15350 636 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 NMT1P30419 496 aaKnown RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CHKAP35790 457 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 DRG2P55039 364 aaKnown RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 ASRGL1Q7L266 308 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 MYLK4Q86YV6 388 aaPredicted RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 ARHGEF2Q92974 986 aaKnown RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 AAASQ9NRG9 546 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 TYW1Q9NV66 732 aaKnown RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 PITPNM2Q9BZ72 1349 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 ZMYM2Q9UBW7 1377 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CREB3O43889 395 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 TNFAIP3P21580 790 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CCND1P24385 295 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CTNNA2P26232 953 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 PICALMQ13492 652 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 PRR16Q569H4 304 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 UTP4Q969X6 686 aaKnown RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CDC42EP4Q9H3Q1 356 aaKnown RBP12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
TM9SF2-201ENST00000376387 CARNS1A5YM72 827 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 hCG_1984214I3L0E3 225 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 FOXN3O00409 490 aaPredicted RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 MYBL1P10243 752 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ANXA13P27216 316 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 SNAP25P60880 206 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 GSTO1P78417 241 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ASPRV1Q53RT3 343 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 CAPRIN2Q6IMN6 1127 aaKnown RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ZNF713Q8N859 430 aaPredicted RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 MYO3BQ8WXR4 1341 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ZBTB39O15060 712 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 SNHG28P0DPA3 235 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 RARGP13631 454 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 COMTP21964 271 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ZNF543Q08ER8 600 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 MESDQ14696 234 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 PHLDB3Q6NSJ2 640 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 SPATA21Q7Z572 469 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 CCDC105Q8IYK2 499 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 SYT2Q8N9I0 419 aaPredicted RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ART4Q93070 314 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 BATF3Q9NR55 127 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 CTTNBP2NLQ9P2B4 639 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ATP8B3O60423 1300 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 SUN1O94901 812 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ALAS1P13196 640 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 CHRNA3P32297 505 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 FMO5P49326 533 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 YIPF3Q9GZM5 350 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 PRKAG3Q9UGI9 489 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 TBK1Q9UHD2 729 aa12.34□□□□□ -0.43
TM9SF2-201ENST00000376387 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.43
TM9SF2-201ENST00000376387 GJB6O95452 261 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 LINGO3P0C6S8 592 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 CETPP11597 493 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 NT5C2P49902 561 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 PEX5P50542 639 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 TAOK1Q7L7X3 1001 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 PRUNE1Q86TP1 453 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 CNKSR1Q969H4 720 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms