RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KRT79Q5XKE5 535 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 DUPD1Q68J44 220 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 ALKBH5Q6P6C2 394 aaKnown RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 RAD54LQ92698 747 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 NSRP1Q9H0G5 558 aaKnown RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 KIAA1024Q9UPX6 916 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 TBC1D12O60347 775 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 MSH2P43246 934 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 ZNF280AP59817 542 aaPredicted RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 COPS2P61201 443 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 PSMC6P62333 389 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 SLC29A2Q14542 456 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 PDIA5Q14554 519 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 TNIP1Q15025 636 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 C10orf76Q5T2E6 689 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 ADAT2Q7Z6V5 191 aaKnown RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 NT5DC3Q86UY8 548 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 ARHGEF3Q9NR81 526 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 TBC1D7Q9P0N9 293 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 STK17AQ9UEE5 414 aa13.91□□□□□ -0.18
MSH5-204ENST00000375755 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
MSH5-204ENST00000375755 POTEFA5A3E0 1075 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 ATP2A2P16615 1042 aaKnown RBP13.9□□□□□ -0.18
MSH5-204ENST00000375755 SLCO1A2P46721 670 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 ZNF131P52739 623 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 PLTPP55058 493 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 CNGA2Q16280 664 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 ETNPPLQ8TBG4 499 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
MSH5-204ENST00000375755 GLG1Q92896 1179 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 DEFB129Q9H1M3 183 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 ZFATQ9P243 1243 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 CCDC38Q502W7 563 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 ZDHHC24Q6UX98 284 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 TRPM4Q8TD43 1214 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 ERP44Q9BS26 406 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 RAB17Q9H0T7 212 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 FGFR1OP2Q9NVK5 253 aa13.9□□□□□ -0.18
MSH5-204ENST00000375755 MSH4O15457 936 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 AGTP01019 485 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 PDE6CP51160 858 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 RWDD2BP57060 319 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 SPIRE1Q08AE8 756 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 ORC2Q13416 577 aaPredicted RBP13.89□□□□□ -0.19
MSH5-204ENST00000375755 TAF11Q15544 211 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 NELFCDQ8IXH7 590 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 FBXO25Q8TCJ0 367 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 HES6Q96HZ4 224 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 WNK4Q96J92 1243 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 OSBPL1AQ9BXW6 950 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 SNX24Q9Y343 169 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 RPTORQ8N122 1335 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 POLR2AP24928 1970 aaKnown RBP13.89□□□□□ -0.19
MSH5-204ENST00000375755 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
MSH5-204ENST00000375755 PTENP60484 403 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 DR1Q01658 176 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 COASYQ13057 564 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 SNX1Q13596 522 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 LRRC14Q15048 493 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 RBBP5Q15291 538 aaKnown RBP13.89□□□□□ -0.19
MSH5-204ENST00000375755 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 WDR18Q9BV38 432 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 CCDC113Q9H0I3 377 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
MSH5-204ENST00000375755 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 ERVK-5Q9HDB9 667 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 HOMER2Q9NSB8 354 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 CYP3A7-CYP3A51PA0A087WV96 503 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 FZD9O00144 591 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 SLC9A1P19634 815 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 CYP3A7P24462 503 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 SREBF1P36956 1147 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 CCNG1P51959 295 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 MAP3K10Q02779 954 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 CYP4A11Q02928 519 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 PSMD2Q13200 908 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 PRKG1Q13976 671 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 DCAF12L1Q5VU92 463 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 FOXR2Q6PJQ5 311 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 ASRGL1Q7L266 308 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
MSH5-204ENST00000375755 DBR1Q9UK59 544 aaKnown RBP13.89□□□□□ -0.19
MSH5-204ENST00000375755 TCP11X1B4DZS4 312 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 ASNSP08243 561 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 ATP4AP20648 1035 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 PLS1Q14651 629 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 RBM46Q8TBY0 533 aaKnown RBP13.88□□□□□ -0.19
MSH5-204ENST00000375755 NAF1Q96HR8 494 aaKnown RBP13.88□□□□□ -0.19
MSH5-204ENST00000375755 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 NENFQ9UMX5 172 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms