RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PRCPP42785 496 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 CAPRIN1Q14444 709 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 DIXDC1Q155Q3 683 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 WLSQ5T9L3 541 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 SPOPLQ6IQ16 392 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 RSPH1Q8WYR4 309 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 CEP95Q96GE4 821 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 AP1M1Q9BXS5 423 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 GPBP1L1Q9HC44 474 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 PDHA1P08559 390 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 HADHAP40939 763 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 NR5A1Q13285 461 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 HEG1Q9ULI3 1381 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 PIGHQ14442 188 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 NDUFAF2Q8N183 169 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 EFHBQ8N7U6 833 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 PPP1R14BQ96C90 147 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 OPTNQ96CV9 577 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 SLCO1B7G3V0H7 640 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 ATP1A1P05023 1023 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 STRBPQ96SI9 672 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 PRMT1Q99873 361 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 A1CFQ9NQ94 594 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 CNOT8Q9UFF9 292 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 LRRIQ1Q96JM4 1722 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 SKIV2L2P42285 1042 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 RANBP1P43487 201 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 ZCWPW2Q504Y3 356 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 PIGOQ8TEQ8 1089 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 TSPAN17Q96FV3 270 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 NAF1Q96HR8 494 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 NSL1Q96IY1 281 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 DNAJC12Q9UKB3 198 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 IVNS1ABPQ9Y6Y0 642 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 ZCCHC11Q5TAX3 1644 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 TMEM253P0C7T8 217 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 TTLL12Q14166 644 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 INPP5DQ92835 1189 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 ZBTB5O15062 677 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 KLHL41O60662 606 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 KYNUQ16719 465 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 MIGA2Q7L4E1 593 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 METTL16Q86W50 562 aaKnown RBP10.79□□□□□ -0.68
PTCH1-204ENST00000375290 LY9Q9HBG7 655 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 C8orf4Q9NR00 106 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 RARGP13631 454 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 RABGAP1LQ5R372 815 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 ERICH1Q86X53 443 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 TRPC4APQ8TEL6 797 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 CNBD2Q96M20 576 aa10.79□□□□□ -0.68
PTCH1-204ENST00000375290 AHCYL1O43865 530 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 PSAPP07602 524 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 KRT76Q01546 638 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 RBBP8NLQ8NC74 664 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 SAR1AQ9NR31 198 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 BFARQ9NZS9 450 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 WDR64B1ANS9 1081 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 H0Y3Z8 333 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 CCDC159P0C7I6 412 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 STX5Q13190 355 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 DPP8Q6V1X1 898 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 ATXN2LQ8WWM7 1075 aaKnown RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 EME1Q96AY2 570 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 FTOQ9C0B1 505 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 TCP11X1B4DZS4 312 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 PSTPIP1O43586 416 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 DDR1Q08345 913 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 FOXR2Q6PJQ5 311 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 SMYD4Q8IYR2 804 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 GRID1Q9ULK0 1009 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 ACTL7BQ9Y614 415 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 SKOR1P84550 965 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 JARID2Q92833 1246 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 TTC17Q96AE7 1141 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 OATP04181 439 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 XIAPP98170 497 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF398Q8TD17 642 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 OSBP2Q969R2 916 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 TRABDQ9H4I3 376 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 PYGMP11217 842 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 PSMA2P25787 234 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 RGS9BPQ6ZS82 235 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 FAM47EQ6ZV65 393 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 ENGASEQ8NFI3 743 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 IL17RAQ96F46 866 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 LGR6Q9HBX8 967 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 AREL1O15033 823 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 LRRN2O75325 713 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 GSTA3Q16772 222 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 TRIM67Q6ZTA4 783 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 LRRC1Q9BTT6 524 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 GPHNQ9NQX3 736 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 H7C1W4 665 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms