RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 GAP43P17677 238 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 MEA1Q16626 185 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 CCDC40Q4G0X9 1142 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 ACRBPQ8NEB7 543 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 ZNF397Q8NF99 534 aaPredicted RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 SUCLA2Q9P2R7 463 aaPredicted RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 SIK3Q9Y2K2 1263 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 TRIM43BA6NCK2 446 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 GAS2O43903 313 aaKnown RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 EVI5O60447 810 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 VTNP04004 478 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 CASQ1P31415 396 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 THPOP40225 353 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 MARSP56192 900 aaKnown RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 TMEM62Q0P6H9 643 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 KNOP1Q1ED39 458 aaKnown RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 FAM102BQ5T8I3 360 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 WDR59Q6PJI9 974 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 MCPH1Q8NEM0 835 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 DPF3Q92784 378 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 TRIM43Q96BQ3 446 aaPredicted RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 WDR24Q96S15 920 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 LZTFL1Q9NQ48 299 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 ZNHIT6Q9NWK9 470 aaKnown RBP17.51■□□□□ 0.39
C9orf78-201ENST00000372447 KCND2Q9NZV8 630 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 TRAF3IP3Q9Y228 551 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 AKT3Q9Y243 479 aa17.51■□□□□ 0.39
C9orf78-201ENST00000372447 ARID2Q68CP9 1835 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 EVPLQ92817 2033 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 ALPK3Q96L96 1907 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 MYBP10242 640 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 CKBP12277 381 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 GUCY2CP25092 1073 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 ARL2P36404 184 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 RGS19P49795 217 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 ADAM9Q13443 819 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 BMT2Q1RMZ1 405 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 IER5Q5VY09 327 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 NME8Q8N427 588 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 PRPF31Q8WWY3 499 aaKnown RBP17.5■□□□□ 0.39
C9orf78-201ENST00000372447 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 PRDM5Q9NQX1 630 aaPredicted RBP17.5■□□□□ 0.39
C9orf78-201ENST00000372447 OLFML3Q9NRN5 406 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
C9orf78-201ENST00000372447 EPN1Q9Y6I3 576 aaPredicted RBP17.5■□□□□ 0.39
C9orf78-201ENST00000372447 UMODL1Q5DID0 1318 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 A0A0U1RQJ8 604 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 RBAK-RBAKDNI3L0D1 243 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 CETN3O15182 167 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 HIP1RO75146 1068 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 FAM13AO94988 1023 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 NDUFA10O95299 355 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 ITGB8P26012 769 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 HOXD13P35453 343 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 RSPH3Q86UC2 560 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 KSR1Q8IVT5 923 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 DAW1Q8N136 415 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 TCP11Q8WWU5 503 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 ATRIPQ8WXE1 791 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 PPP1R16BQ96T49 567 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 PPP1R12CQ9BZL4 782 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 HIPK3Q9H422 1215 aa17.49■□□□□ 0.39
C9orf78-201ENST00000372447 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 PDXKO00764 312 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 CALUO43852 315 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 PRPF6O94906 941 aaKnown RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 GCNT3O95395 438 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 CTSHP09668 335 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 NCBP1Q09161 790 aaKnown RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 MAPK7Q13164 816 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 BFSP2Q13515 415 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 TRAF7Q6Q0C0 670 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 RHPN2Q8IUC4 686 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 TRIM59Q8IWR1 403 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 ASAP3Q8TDY4 903 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 ZNF668Q96K58 619 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 POLR3FQ9H1D9 316 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 MMRN2Q9H8L6 949 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 KIAA0355O15063 1070 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 KIF5CO60282 957 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 GPR32O75388 356 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 URI1O94763 535 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 CHRNA1P02708 482 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 GLRA2P23416 452 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 NR2F2P24468 414 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 CYP2C18P33260 490 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 NLRP11P59045 1033 aaKnown RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 LAMTOR4Q0VGL1 99 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 KIZQ2M2Z5 673 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 MYCT1Q8N699 235 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 CCDC155Q8N6L0 562 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 ANKRD7Q92527 254 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms