RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FGGP02679 453 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 KCNA2P16389 499 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 PPM1KQ8N3J5 372 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 CCDC26Q8TAB7 109 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 NTPCRQ9BSD7 190 aaKnown RBP31.25■■■□□ 2.59
SSBP3-204ENST00000371320 C17orf75Q9HAS0 396 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 SGPL1O95470 568 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 HADHBP55084 474 aaKnown RBP31.24■■■□□ 2.59
SSBP3-204ENST00000371320 SOX10P56693 466 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 PRAMEF18Q5VWM3 479 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 KRT39Q6A163 491 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 MAATS1Q7Z4T9 603 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 FAM71AQ8IYT1 594 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 PARD3BQ8TEW8 1205 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 ARL8AQ96BM9 186 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 CTTNBP2NLQ9P2B4 639 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 AMACRQ9UHK6 382 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 ZNF214Q9UL59 606 aaPredicted RBP31.24■■■□□ 2.59
SSBP3-204ENST00000371320 DOCK1Q14185 1865 aa31.24■■■□□ 2.59
SSBP3-204ENST00000371320 PSAPP07602 524 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 MFAP3P55082 362 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 SWSAP1Q6NVH7 229 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 LRRC31Q6UY01 552 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 PROCA1Q8NCQ7 364 aaPredicted RBP31.23■■■□□ 2.59
SSBP3-204ENST00000371320 SEMA4DQ92854 862 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 C12orf42Q96LP6 360 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 KREMEN1Q96MU8 473 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 CARD9Q9H257 536 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 ADAMTS5Q9UNA0 930 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 GPC5P78333 572 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 TTMPQ5BVD1 217 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 FZD1Q9UP38 647 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 PFASO15067 1338 aa31.23■■■□□ 2.59
SSBP3-204ENST00000371320 BHMG1C9JSJ3 638 aaPredicted RBP31.22■■■□□ 2.59
SSBP3-204ENST00000371320 RTN2O75298 545 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 RGS20O76081 388 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 PRPF4BQ13523 1007 aaKnown RBP31.22■■■□□ 2.59
SSBP3-204ENST00000371320 TMEM132BQ14DG7 1078 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 DCAF12L1Q5VU92 463 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 EPS8L1Q8TE68 723 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 PIK3R5Q8WYR1 880 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 POP1Q99575 1024 aaKnown RBP31.22■■■□□ 2.59
SSBP3-204ENST00000371320 TMEM8AQ9HCN3 771 aa31.22■■■□□ 2.59
SSBP3-204ENST00000371320 JPH1Q9HDC5 661 aaPredicted RBP31.22■■■□□ 2.59
SSBP3-204ENST00000371320 STBD1O95210 358 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 ECHS1P30084 290 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 HSPA9P38646 679 aaKnown RBP31.21■■■□□ 2.59
SSBP3-204ENST00000371320 NOP9Q86U38 636 aaKnown RBP31.21■■■□□ 2.59
SSBP3-204ENST00000371320 POMGNT1Q8WZA1 660 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 RNPC3Q96LT9 517 aaKnown RBP31.21■■■□□ 2.59
SSBP3-204ENST00000371320 NOCTQ9UK39 431 aaKnown RBP31.21■■■□□ 2.59
SSBP3-204ENST00000371320 PARP14Q460N5 1801 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 C19orf81C9J6K1 198 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 KRT14P02533 472 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 CHRNB2P17787 502 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 SP4Q02446 784 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 TCEAL1Q15170 157 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 SLC39A4Q6P5W5 647 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 DDX42Q86XP3 938 aaKnown RBP eCLIP31.21■■■□□ 2.59
SSBP3-204ENST00000371320 TMC2Q8TDI7 906 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 CDHR1Q96JP9 859 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 PCDHB18PQ96TA0 734 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 NAP1L3Q99457 506 aaPredicted RBP31.21■■■□□ 2.59
SSBP3-204ENST00000371320 COQ4Q9Y3A0 265 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 ALG6Q9Y672 507 aa31.21■■■□□ 2.59
SSBP3-204ENST00000371320 ZNF233A6NK53 670 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 FZD9O00144 591 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 CYP26A1O43174 497 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 SHOX2O60902 331 aaPredicted RBP31.2■■■□□ 2.59
SSBP3-204ENST00000371320 ANGEL2Q5VTE6 544 aaKnown RBP31.2■■■□□ 2.59
SSBP3-204ENST00000371320 MCPH1Q8NEM0 835 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 SHC3Q92529 594 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 MFSD14AQ96MC6 490 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 CYP39A1Q9NYL5 469 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 SLC9A2Q9UBY0 812 aa31.2■■■□□ 2.59
SSBP3-204ENST00000371320 DGAT1O75907 488 aa31.2■■■□□ 2.58
SSBP3-204ENST00000371320 C11orf63Q6NUN7 778 aa31.2■■■□□ 2.58
SSBP3-204ENST00000371320 USP37Q86T82 979 aa31.2■■■□□ 2.58
SSBP3-204ENST00000371320 FBXL18Q96ME1 805 aa31.2■■■□□ 2.58
SSBP3-204ENST00000371320 TEX13BQ9BXU2 312 aa31.2■■■□□ 2.58
SSBP3-204ENST00000371320 SEPT9Q9UHD8 586 aaPredicted RBP31.2■■■□□ 2.58
SSBP3-204ENST00000371320 NFASCO94856 1347 aa31.2■■■□□ 2.58
SSBP3-204ENST00000371320 TTI1O43156 1089 aa31.19■■■□□ 2.58
SSBP3-204ENST00000371320 GPC3P51654 580 aa31.19■■■□□ 2.58
SSBP3-204ENST00000371320 SLC47A2Q86VL8 602 aa31.19■■■□□ 2.58
SSBP3-204ENST00000371320 CD302Q8IX05 232 aa31.19■■■□□ 2.58
SSBP3-204ENST00000371320 ACAD9Q9H845 621 aa31.19■■■□□ 2.58
SSBP3-204ENST00000371320 TELO2Q9Y4R8 837 aa31.19■■■□□ 2.58
SSBP3-204ENST00000371320 GZMAP12544 262 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 NAA35Q5VZE5 725 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 APOBEC3FQ8IUX4 373 aaKnown RBP31.18■■■□□ 2.58
SSBP3-204ENST00000371320 FBXL13Q8NEE6 735 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 NT5C1BQ96P26 610 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 PDLIM7Q9NR12 457 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 TOPORSQ9NS56 1045 aaPredicted RBP31.18■■■□□ 2.58
SSBP3-204ENST00000371320 ADGRA3Q8IWK6 1321 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 GTF2H1P32780 548 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 ACTR2P61160 394 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 PRKCEQ02156 737 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 CYP24A1Q07973 514 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms