RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ZSWIM1Q9BR11 485 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 METTL14Q9HCE5 456 aaKnown RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ASIC3Q9UHC3 531 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ANKRD62A6NC57 917 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 CLDN3O15551 220 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 LDHCP07864 332 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 CDCA2Q69YH5 1023 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 SYT2Q8N9I0 419 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 MRRFQ96E11 262 aaKnown RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 OSBPL1AQ9BXW6 950 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 UBE2TQ9NPD8 197 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 TISP43B9A030 160 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 MAP3K13O43283 966 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SPOPO43791 374 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 LINGO3P0C6S8 592 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 CHRNB2P17787 502 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 RHBDL3P58872 404 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 RRP1BQ14684 758 aaKnown RBP13.19□□□□□ -0.3
PHGDH-201ENST00000369407 DDB1Q16531 1140 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SPDYCQ5MJ68 293 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 ZNF449Q6P9G9 518 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
PHGDH-201ENST00000369407 AGPAT1Q99943 283 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 HAO1Q9UJM8 370 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 EML1O00423 815 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 ZBTB5O15062 677 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SPAG7O75391 227 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 CALCAP01258 141 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 PYGLP06737 847 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-201ENST00000369407 PSMC2P35998 433 aaKnown RBP13.19□□□□□ -0.3
PHGDH-201ENST00000369407 TUBP50607 506 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 ZNF131P52739 623 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 DLG4P78352 724 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 C11orf91Q3C1V1 193 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-201ENST00000369407 ART4Q93070 314 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 SYT11Q9BT88 431 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 PCIF1Q9H4Z3 704 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
PHGDH-201ENST00000369407 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 CTNNA2P26232 953 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 TM4SF1P30408 202 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 FOXN2P32314 431 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
PHGDH-201ENST00000369407 USP4Q13107 963 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 CLEC4GQ6UXB4 293 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 ASRGL1Q7L266 308 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
PHGDH-201ENST00000369407 IFT74Q96LB3 600 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 STMN4Q9H169 189 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-201ENST00000369407 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-201ENST00000369407 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 IRS2Q9Y4H2 1338 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 PODXLO00592 558 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 FAM13AO94988 1023 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 RANBP1P43487 201 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 KRT17Q04695 432 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 TNFAIP8L3Q5GJ75 292 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 DAB2IPQ5VWQ8 1189 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 ARHGEF19Q8IW93 802 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 ERP27Q96DN0 273 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 MYLK2Q9H1R3 596 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 DNAJC18Q9H819 358 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 KLHL14Q9P2G3 628 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 PCYOX1Q9UHG3 505 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 TP73O15350 636 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 PEX5P50542 639 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 MYL7Q01449 175 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
PHGDH-201ENST00000369407 SLC13A5Q86YT5 568 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-201ENST00000369407 NAF1Q96HR8 494 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms